UFGI Publication Round-up: Week of 7/11/22

Liu L, Lyu X, Pan Z, Wang Q, Mu W, Benny U, Rollins JA, Pan H.

Phytopathology. 2022 Jul;112(7):1476-1485. doi: 10.1094/PHYTO-09-21-0378-R. Epub 2022 Jun 13.

PMID: 35021860

LepTraits 1.0 A globally comprehensive dataset of butterfly traits.

Shirey V, Larsen E, Doherty A, Kim CA, Al-Sulaiman FT, Hinolan JD, Itliong MGA, Naive MAK, Ku M, Belitz M, Jeschke G, Barve V, Lamas G, Kawahara AY, Guralnick R, Pierce NE, Lohman DJ, Ries L.

Sci Data. 2022 Jul 6;9(1):382. doi: 10.1038/s41597-022-01473-5.

PMID: 35794183

Assessing putative bias in prediction of anti-microbial resistance from real-world genotyping data under explicit causal assumptions.

Prosperi M, Boucher C, Bian J, Marini S.

Artif Intell Med. 2022 Aug;130:102326. doi: 10.1016/j.artmed.2022.102326. Epub 2022 Jun 3.

PMID: 35809965

Peptide mediated, enhanced toxicity of a bacterial pesticidal protein against southern green stink bug.

Banerjee R, Flores-Escobar B, Chougule NP, Cantón PE, Dumitru R, Bonning BC.

Microb Biotechnol. 2022 Jul;15(7):2071-2082. doi: 10.1111/1751-7915.14030. Epub 2022 Mar 22.

PMID: 35315236

A High-Throughput Screening Platform Identifies Novel Combination Treatments for Malignant Peripheral Nerve Sheath Tumors.

Fernández-Rodríguez J, Creus-Bachiller E, Zhang X, Martínez-Iniesta M, Ortega-Bertran S, Guha R, Thomas CJ, Wallace MR, Romagosa C, Salazar-Huayna L, Reilly KM, Blakely JO, Serra-Musach J, Pujana MA, Serra E, Villanueva A, Ferrer M, Lázaro C.

Mol Cancer Ther. 2022 Jul 5;21(7):1246-1258. doi: 10.1158/1535-7163.MCT-21-0947.

PMID: 35511749

Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae).

Salter JF, Hosner PA, L E Tsai W, McCormack JE, Braun EL, Kimball RT, Brumfield RT, Faircloth BC.

Mol Phylogenet Evol. 2022 Jul 5:107559. doi: 10.1016/j.ympev.2022.107559. Online ahead of print.

PMID: 35803448

Alpha-1 antitrypsin: a novel biomarker and potential therapeutic approach for metabolic diseases.

Zhang X, Ostrov DA, Tian H.

Clin Chim Acta. 2022 Jul 7:S0009-8981(22)01226-8. doi: 10.1016/j.cca.2022.07.005. Online ahead of print.

PMID: 35810800

Future of Bacterial Disease Management in Crop Production.

Sharma A, Abrahamian P, Carvalho R, Choudhary M, Paret ML, Vallad GE, Jones JB.

Annu Rev Phytopathol. 2022 Jul 5. doi: 10.1146/annurev-phyto-021621-121806. Online ahead of print.

PMID: 35790244

Categorical edge-based analyses of phylogenomic data reveal conflicting signals for difficult relationships in the avian tree.

Wang N, Braun EL, Liang B, Cracraft J, Smith SA.

Mol Phylogenet Evol. 2022 Sep;174:107550. doi: 10.1016/j.ympev.2022.107550. Epub 2022 Jun 9.

PMID: 35691570

Glycine betaine uptake and metabolism in marine microbial communities.

Boysen AK, Durham BP, Kumler W, Key RS, Heal KR, Carlson LT, Groussman RD, Armbrust EV, Ingalls AE.

Environ Microbiol. 2022 May;24(5):2380-2403. doi: 10.1111/1462-2920.16020. Epub 2022 May 6.

PMID: 35466501

Individual and Synergistic Anti-Coronavirus Activities of SOCS1/3 Antagonist and Interferon α1 Peptides.

Ahmed CM, Grams TR, Bloom DC, Johnson HM, Lewin AS.

Front Immunol. 2022 Jun 21;13:902956. doi: 10.3389/fimmu.2022.902956. eCollection 2022.

PMID: 35799776

Health risk associated with heavy metal contamination of vegetables grown in agricultural soil of Siran valley, Mansehra, Pakistan-a case study.

Tahir MA, Shaheen H, Rathinasabapathi B.

Environ Monit Assess. 2022 Jul 1;194(8):551. doi: 10.1007/s10661-022-10210-9.

PMID: 35778622

Advances in Plant Metabolomics and Its Applications in Stress and Single-Cell Biology.

Katam R, Lin C, Grant K, Katam CS, Chen S.

Int J Mol Sci. 2022 Jun 23;23(13):6985. doi: 10.3390/ijms23136985.

PMID: 35805979

Genomic loci associated with performance limiting equine overriding spinous processes (kissing spines).

Patterson Rosa L, Whitaker B, Allen K, Peters D, Buchanan B, McClure S, Honnas C, Buchanan C, Martin K, Lundquist E, Vierra M, Foster G, Brooks SA, Lafayette C.

Res Vet Sci. 2022 Jun 30;150:65-71. doi: 10.1016/j.rvsc.2022.06.015. Online ahead of print.

PMID: 35803009

Non-frameshift deletion on MITF is associated with a novel splashed white spotting pattern in horses (Equus caballus).

Patterson Rosa L, Martin K, Vierra M, Foster G, Brooks SA, Lafayette C.

Anim Genet. 2022 Aug;53(4):538-540. doi: 10.1111/age.13225. Epub 2022 Jun 7.

PMID: 35672910

Lipogenesis mediated by OGR1 regulates metabolic adaptation to acid stress in cancer cells via autophagy.

Pillai S, Mahmud I, Mahar R, Griffith C, Langsen M, Nguyen J, Wojtkowiak JW, Swietach P, Gatenby RA, Bui MM, Merritt ME, McDonald P, Garrett TJ, Gillies RJ.

Cell Rep. 2022 May 10;39(6):110796. doi: 10.1016/j.celrep.2022.110796.

PMID: 35545051

Q134R: Small chemical compound with NFAT inhibitory properties improves behavioral performance and synapse function in mouse models of amyloid pathology.

Sompol P, Gollihue JL, Kraner SD, Artiushin IA, Cloyd RA, Chishti EA, Koren SA, Nation GK, Abisambra JF, Huzian O, Nagy LI, Santha M, Hackler L Jr, Puskas LG, Norris CM.

Aging Cell. 2021 Jul;20(7):e13416. doi: 10.1111/acel.13416. Epub 2021 Jun 12.

PMID: 34117818

Recommendations to encourage participation of individuals from diverse backgrounds in psychiatric genetic studies.

MacDermod C, Pettie MA, Carrino EA, Garcia SC, Padalecki S, Finch JE, Sanzari C, Kennedy HL, Pawar PS, Mcgough MM, Iwashita A, Takgbajouah M, Coan D, Szakasits L, Goode RW, Wu YK, Reyes-Rodríguez ML, Vacuán EMTC, Kennedy MA, Cleland L, Jordan J, Maguire S, Guintivano JD, Giusti-Rodríguez P, Baker JH, Thornton LM, Bulik CM.

Am J Med Genet B Neuropsychiatr Genet. 2022 Jul 4. doi: 10.1002/ajmg.b.32906. Online ahead of print.

PMID: 35785430

Mixed-type multivariate response regression with covariance estimation.

Ekvall KO, Molstad AJ.

Stat Med. 2022 Jul 10;41(15):2768-2785. doi: 10.1002/sim.9383. Epub 2022 Mar 24.

PMID: 35699353

A framework to integrate innovations in invasion science for proactive management.

van Rees CB, Hand BK, Carter SC, Bargeron C, Cline TJ, Daniel W, Ferrante JA, Gaddis K, Hunter ME, Jarnevich CS, McGeoch MA, Morisette JT, Neilson ME, Roy HE, Rozance MA, Sepulveda A, Wallace RD, Whited D, Wilcox T, Kimball JS, Luikart G.

Biol Rev Camb Philos Soc. 2022 Aug;97(4):1712-1735. doi: 10.1111/brv.12859. Epub 2022 Apr 22.

PMID: 35451197

Global genetic diversity status and trends: towards a suite of Essential Biodiversity Variables (EBVs) for genetic composition.

Hoban S, Archer FI, Bertola LD, Bragg JG, Breed MF, Bruford MW, Coleman MA, Ekblom R, Funk WC, Grueber CE, Hand BK, Jaffé R, Jensen E, Johnson JS, Kershaw F, Liggins L, MacDonald AJ, Mergeay J, Miller JM, Muller-Karger F, O’Brien D, Paz-Vinas I, Potter KM, Razgour O, Vernesi C, Hunter ME.

Biol Rev Camb Philos Soc. 2022 Aug;97(4):1511-1538. doi: 10.1111/brv.12852. Epub 2022 Apr 12.

PMID: 35415952

Novel insights on aquatic mammal MHC evolution: Evidence from manatee DQB diversity.

Sá ALA, Baker PKB, Breaux B, Oliveira JM, Klautau AGCM, Legatzki K, Luna FO, Attademo FLN, Hunter ME, Criscitiello MF, Schneider MPC, Sena LDS.

Dev Comp Immunol. 2022 Jul;132:104398. doi: 10.1016/j.dci.2022.104398. Epub 2022 Mar 17.

PMID: 35307479

Multiple-trait random regression modeling of feed efficiency in US Holsteins.

Khanal P, Parker Gaddis KL, Vandehaar MJ, Weigel KA, White HM, Peñagaricano F, Koltes JE, Santos JEP, Baldwin RL, Burchard JF, Dürr JW, Tempelman RJ.

J Dairy Sci. 2022 Jul;105(7):5954-5971. doi: 10.3168/jds.2021-21739. Epub 2022 May 28.

PMID: 35636997

Postoperative Overtriage to an Intensive Care Unit Is Associated With Low Value of Care.

Loftus TJ, Ruppert MM, Ozrazgat-Baslanti T, Balch JA, Shickel B, Hu D, Efron PA, Tighe PJ, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A.

Ann Surg. 2022 Jul 6. doi: 10.1097/SLA.0000000000005460. Online ahead of print.

PMID: 35797553

Preoperative computed tomography for acutely incarcerated ventral or inguinal hernia.

Knewitz DK, Kirkpatrick SL, Jenkins PD, Al-Mansour M, Rosenthal MD, Efron PA, Loftus TJ.

Surgery. 2022 Jul;172(1):193-197. doi: 10.1016/j.surg.2022.01.014. Epub 2022 Mar 15.

PMID: 35304009

Genome-wide Association Meta-analysis of Childhood and Adolescent Internalizing Symptoms.

Jami ES, Hammerschlag AR, Ip HF, Allegrini AG, Benyamin B, Border R, Diemer EW, Jiang C, Karhunen V, Lu Y, Lu Q, Mallard TT, Mishra PP, Nolte IM, Palviainen T, Peterson RE, Sallis HM, Shabalin AA, Tate AE, Thiering E, Vilor-Tejedor N, Wang C, Zhou A, Adkins DE, Alemany S, Ask H, Chen Q, Corley RP, Ehli EA, Evans LM, Havdahl A, Hagenbeek FA, Hakulinen C, Henders AK, Hottenga JJ, Korhonen T, Mamun A, Marrington S, Neumann A, Rimfeld K, Rivadeneira F, Silberg JL, van Beijsterveldt CE, Vuoksimaa E, Whipp AM, Tong X, Andreassen OA, Boomsma DI, Brown SA, Burt SA, Copeland W, Dick DM, Harden KP, Harris KM, Hartman CA, Heinrich J, Hewitt JK, Hopfer C, Hypponen E, Jarvelin MR, Kaprio J, Keltikangas-Järvinen L, Klump KL, Krauter K, Kuja-Halkola R, Larsson H, Lehtimäki T, Lichtenstein P, Lundström S, Maes HH, Magnus P, Munafò MR, Najman JM, Njølstad PR, Oldehinkel AJ, Pennell CE, Plomin R, Reichborn-Kjennerud T, Reynolds C, Rose RJ, Smolen A, Snieder H, Stallings M, Standl M, Sunyer J, Tiemeier H, Wadsworth SJ, Wall TL, Whitehouse AJO, Williams GM, Ystrøm E, Nivard MG, Bartels M, Middeldorp CM.

J Am Acad Child Adolesc Psychiatry. 2022 Jul;61(7):934-945. doi: 10.1016/j.jaac.2021.11.035. Epub 2022 Apr 1.

PMID: 35378236

Engineering Vascular Grafts with Multiphase Structures.

James BD, Allen JB.

Methods Mol Biol. 2022;2375:115-124. doi: 10.1007/978-1-0716-1708-3_10.

PMID: 34591303

Structures of LIG1 that engage with mutagenic mismatches inserted by polβ in base excision repair.

Tang Q, Gulkis M, McKenna R, Çağlayan M.

Nat Commun. 2022 Jul 5;13(1):3860. doi: 10.1038/s41467-022-31585-w.

PMID: 35790757

Patient out-of-pocket and payer costs for pegfilgrastim originator vs biosimilars as primary prophylaxis of febrile neutropenia in the first cycle among a commercially insured population.

Wang CY, Park H, Heldermon CD, Vouri SM, Brown JD.