UFGI Publication Round-up: Week of 4/17/23

Browning CR, Ford JL, Tarrence J, Kertes DA, Pickler RH, Way BM, Calder CA.

Psychoneuroendocrinology. 2023 Mar 20;153:106088. doi: 10.1016/j.psyneuen.2023.106088. Online ahead of print.

PMID: 37058913

Studies on diketopiperazine and dipeptide analogs as opioid receptor ligands.

Shahbazi Nia S, Hossain MA, Ji G, Jonnalagadda SK, Obeng S, Rahman MA, Sifat AE, Nozohouri S, Blackwell C, Patel D, Thompson J, Runyon S, Hiranita T, McCurdy CR, McMahon L, Abbruscato TJ, Trippier PC, Neugebauer V, German NA.

Eur J Med Chem. 2023 Mar 29;254:115309. doi: 10.1016/j.ejmech.2023.115309. Online ahead of print.

PMID: 37054561

Evidence for origin of lavender foal syndrome among Egyptian Arabian horses in Egypt.

AbouEl Ela NH, El Araby IE, Saleh AA, Abd El-Fattah AH, Hagag NM, Brooks SA, Radwan MA, Kalbfleisch T.

Equine Vet J. 2023 May;55(3):487-493. doi: 10.1111/evj.13604. Epub 2022 Jul 12.

PMID: 35665534

Methylscaper: an R/Shiny app for joint visualization of DNA methylation and nucleosome occupancy in single-molecule and single-cell data.

Knight P, Gauthier ML, Pardo CE, Darst RP, Kapadia K, Browder H, Morton E, Riva A, Kladde MP, Bacher R.

Bioinformatics. 2021 Dec 11;37(24):4857-4859. doi: 10.1093/bioinformatics/btab438.

PMID: 34125875

Screening of Drosophila microRNA-degradation sequences reveals Argonaute1 mRNA’s role in regulating miR-999.

Sheng P, Li L, Li T, Wang Y, Hiers NM, Mejia JS, Sanchez JS, Zhou L, Xie M.

Nat Commun. 2023 Apr 13;14(1):2108. doi: 10.1038/s41467-023-37819-9.

PMID: 37055443

Normalization by distributional resampling of high throughput single-cell RNA-sequencing data.

Brown J, Ni Z, Mohanty C, Bacher R, Kendziorski C.

Bioinformatics. 2021 Nov 18;37(22):4123-4128. doi: 10.1093/bioinformatics/btab450.

PMID: 34146085

Pain interference mediates the association between epigenetic aging and grip strength in middle to older aged males and females with chronic pain.

Peterson JA, Crow JA, Johnson AJ, Meng L, Rani A, Huo Z, Foster TC, Fillingim RB, Cruz-Almeida Y.

Front Aging Neurosci. 2023 Mar 23;15:1122364. doi: 10.3389/fnagi.2023.1122364. eCollection 2023.

PMID: 37032822

Longitudinal lipidomic signatures of all-cause and CVD mortality in American Indians: findings from the Strong Heart Study.

Miao G, Fiehn O, Malloy KM, Zhang Y, Lee ET, Howard BV, Zhao J.

Geroscience. 2023 Apr 13. doi: 10.1007/s11357-023-00793-7. Online ahead of print.

PMID: 37055600

Feasibility study of busulfan, fludarabine, and thiotepa conditioning regimen for allogeneic hematopoietic stemcell transplantationfor children and young adults with nonmalignant disorders.

Fraser A, Castillo P, Cascio E, Moore-Higgs G, Farhadfar N, Fort J, Slayton W, Lamba J, Horn B.

Pediatr Blood Cancer. 2023 Apr 12:e30322. doi: 10.1002/pbc.30322. Online ahead of print.

PMID: 37046407

Nitric oxide signaling in ctenophores.

Moroz LL, Mukherjee K, Romanova DY.

Front Neurosci. 2023 Mar 22;17:1125433. doi: 10.3389/fnins.2023.1125433. eCollection 2023.

PMID: 37034176

4′-Deoxypyridoxine disrupts vitamin B₆ homeostasis in Escherichia coli K12 through combined inhibition of cumulative B₆ uptake and PLP-dependent enzyme activity.

Babor J, Tramonti A, Nardella C, Deutschbauer A, Contestabile R, de Crécy-Lagard V.

Microbiology (Reading). 2023 Apr;169(4). doi: 10.1099/mic.0.001319.

PMID: 37040165

DAXX drives de novo lipogenesis and contributes to tumorigenesis.

Mahmud I, Tian G, Wang J, Hutchinson TE, Kim BJ, Awasthee N, Hale S, Meng C, Moore A, Zhao L, Lewis JE, Waddell A, Wu S, Steger JM, Lydon ML, Chait A, Zhao LY, Ding H, Li JL, Purayil HT, Huo Z, Daaka Y, Garrett TJ, Liao D.

Nat Commun. 2023 Apr 12;14(1):1927. doi: 10.1038/s41467-023-37501-0.

PMID: 37045819

Development of a translatable gene augmentation therapy for CNGB1-Retinitis Pigmentosa.

Occelli LM, Zobel L, Stoddard J, Wagner J, Pasmanter N, Querubin J, Renner LM, Reynaga R, Winkler PA, Sun K, Felipe Lp Marinho L, O’Riordan CR, Frederick A, Lauer A, Tsang SH, Hauswirth WW, McGill TJ, Neuringer M, Michalakis S, Petersen-Jones SM.

Mol Ther. 2023 Apr 13:S1525-0016(23)00203-4. doi: 10.1016/j.ymthe.2023.04.005. Online ahead of print.

PMID: 37056049

Comparison of different gene-therapy methods to treat Leber hereditary optic neuropathy in a mouse model.

Velmurugan S, Chou TH, Eastwood JD, Porciatti V, Liu Y, Hauswirth WW, Guy J, Yu H.

Front Neurosci. 2023 Mar 27;17:1119724. doi: 10.3389/fnins.2023.1119724. eCollection 2023.

PMID: 37051151

Mediation of Reduced Hippocampal Volume by Cerebral Amyloid Angiopathy in Pathologically Confirmed Patients with Alzheimer’s Disease.

Nagaraja N, Wang WE, Duara R, DeKosky ST, Vaillancourt D.

J Alzheimers Dis. 2023 Apr 1. doi: 10.3233/JAD-220624. Online ahead of print.

PMID: 37038809