UFGI Publication Round-up: Week of 12/25/23

Mathavan A, Mathavan A, Ataya A.

JAMA. 2023 Dec 18. doi: 10.1001/jama.2023.22990. Online ahead of print.

PMID: 38109147

Antimicrobial resistance education under One Health umbrella.

Czyz DM, Al-Mazroa Smith S.

J Microbiol Biol Educ. 2023 Oct 30;24(3):e00148-23. doi: 10.1128/jmbe.00148-23. eCollection 2023 Dec.

PMID: 38107987

Inhibition of LRRK2 kinase activity rescues deficits in striatal dopamine physiology in VPS35 p.D620N knock-in mice.

Bu M, Follett J, Deng I, Tatarnikov I, Wall S, Guenther D, Maczis M, Wimsatt G, Milnerwood A, Moehle MS, Khoshbouei H, Farrer MJ.

NPJ Parkinsons Dis. 2023 Dec 18;9(1):167. doi: 10.1038/s41531-023-00609-7.

PMID: 38110354

Host and rumen microbiome contributions to feed efficiency traits in Holstein cows.

Boggio GM, Monteiro HF, Lima FS, Figueiredo CC, Bisinotto RS, Santos JEP, Mion B, Schenkel FS, Ribeiro ES, Weigel KA, Peñagaricano F.

J Dairy Sci. 2023 Dec 20:S0022-0302(23)02007-6. doi: 10.3168/jds.2023-23869. Online ahead of print.

PMID: 38135048

Design and optimization of piperlongumine analogs as potent senolytics.

Zhang X, He Y, Liu X, Zhang X, Shi P, Wang Y, Zhou D, Zheng G.

Bioorg Med Chem Lett. 2023 Dec 15;98:129593. doi: 10.1016/j.bmcl.2023.129593. Online ahead of print.

PMID: 38104906

Impact of polβ/XRCC1 interaction variants on the efficiency of nick sealing by DNA ligase IIIα in the base excision repair pathway.

Almohdar D, Gulkis M, Ortiz A, Tang Q, Sobol RW, Çağlayan M.

J Mol Biol. 2023 Dec 20:168410. doi: 10.1016/j.jmb.2023.168410. Online ahead of print.

PMID: 38135179

Technical note: ShinyAnimalCV: open-source cloud-based web application for object detection, segmentation, and three-dimensional visualization of animals using computer vision.

Wang J, Hu Y, Xiang L, Morota G, Brooks SA, Wickens CL, Miller-Cushon EK, Yu H.

J Anim Sci. 2023 Dec 22:skad416. doi: 10.1093/jas/skad416. Online ahead of print.

PMID: 38134209

Cellular and subcellular localization of Rab10 and phospho-T73 Rab10 in the mouse and human brain.

Singh V, Menard MA, Serrano GE, Beach TG, Zhao HT, Riley-DiPaolo A, Subrahmanian N, LaVoie MJ, Volpicelli-Daley LA.

Acta Neuropathol Commun. 2023 Dec 18;11(1):201. doi: 10.1186/s40478-023-01704-9.

PMID: 38110990

Heritable changes of epialleles near genes in maize can be triggered in the absence of CHH methylation.

Liu B, Yang D, Wang D, Liang C, Wang J, Lisch D, Zhao M.

Plant Physiol. 2023 Dec 18:kiad668. doi: 10.1093/plphys/kiad668. Online ahead of print.

PMID: 38109503

Learning from vertically distributed data across multiple sites: An efficient privacy-preserving algorithm for Cox proportional hazards model with variable selection.

Miao G, Yu L, Yang J, Bennett DA, Zhao J, Wu SS.

J Biomed Inform. 2023 Dec 22:104581. doi: 10.1016/j.jbi.2023.104581. Online ahead of print.

PMID: 38142903

Buspirone Enhances Cell Survival and Preserves Structural Integrity during Oxidative Injury to the Retinal Pigment Epithelium.

Biswal MR, Paulson RJ, Vichare R, Lewin AS.

Antioxidants (Basel). 2023 Dec 17;12(12):2129. doi: 10.3390/antiox12122129.

PMID: 38136248

Syncytial nets vs. chemical signaling: emerging properties of alternative integrative systems.

Moroz LL.

Front Cell Dev Biol. 2023 Dec 6;11:1320209. doi: 10.3389/fcell.2023.1320209. eCollection 2023.

PMID: 38125877

Long-term comparative effectiveness of pegvaliase versus medical nutrition therapy with and without sapropterin in adults with phenylketonuria.

Burton BK, Clague GE, Harding CO, Kucuksayrac E, Levy DG, Lindstrom K, Longo N, Maillot F, Muntau AC, Rutsch F, Zori RT.

Mol Genet Metab. 2023 Dec 15;141(1):108114. doi: 10.1016/j.ymgme.2023.108114. Online ahead of print.

PMID: 38142628

Transcriptomic dynamics in the transition from ground to space are revealed by Virgin Galactic human-tended suborbital spaceflight.

Ferl RJ, Zhou M, Strickland HF, Haveman NJ, Callaham JB, Bandla S, Ambriz D, Paul AL.

NPJ Microgravity. 2023 Dec 20;9(1):95. doi: 10.1038/s41526-023-00340-w.

PMID: 38123588

Chromosome-level genome of putative autohexaploid Actinidia deliciosa provides insights into polyploidisation and evolution.

Liu Y, Zhou Y, Cheng F, Zhou R, Yang Y, Wang Y, Zhang X, Soltis DE, Xiao N, Quan Z, Li J.

Plant J. 2023 Dec 19. doi: 10.1111/tpj.16592. Online ahead of print.

PMID: 38112590

rAAV-compatible human mini promoters enhance transgene expression in rat retinal ganglion cells.

Araujo VG, Dias MS, Hauswirth WW, Linden R, Petrs-Silva H.

Exp Eye Res. 2023 Dec 18;239:109758. doi: 10.1016/j.exer.2023.109758. Online ahead of print.

PMID: 38123011

Vitamin D Metabolism Genes Are Differentially Methylated in Individuals with Chronic Knee Pain.

Strath LJ, Meng L, Rani A, Huo Z, Foster TC, Fillingim RB, Cruz-Almeida Y.

Lifestyle Genom. 2023;16(1):98-105. doi: 10.1159/000529823. Epub 2023 Feb 28.

PMID: 36854277

Altered Transcriptome Response in PBMCs of Czech Adults Linked to Multiple PFAS Exposure: B Cell Development as a Target of PFAS Immunotoxicity.

Rudzanová B, Thon V, Vespalcová H, Martyniuk CJ, Piler P, Zvonař M, Klánová J, Bláha L, Adamovsky O.

Environ Sci Technol. 2023 Dec 19. doi: 10.1021/acs.est.3c05109. Online ahead of print.

PMID: 38112183

Oxidative stress, antioxidant defense responses, and histopathology: Biomarkers for monitoring exposure to pyrogallol in Clarias gariepinus.

Hamed M, Soliman HAM, Said REM, Martyniuk CJ, Osman AGM, Sayed AEH.

J Environ Manage. 2023 Dec 17;351:119845. doi: 10.1016/j.jenvman.2023.119845. Online ahead of print.

PMID: 38109825

Low-Dose Antithymocyte Globulin: A Pragmatic Approach to Treating Stage 2 Type 1 Diabetes.

Foster TP, Jacobsen LM, Bruggeman B, Salmon C, Hosford J, Chen A, Cintron M, Mathews CE, Wasserfall C, Brusko MA, Brusko TM, Atkinson MA, Schatz DA, Haller MJ.

Diabetes Care. 2023 Dec 20:dc231750. doi: 10.2337/dc23-1750. Online ahead of print.

PMID: 38117469

An innovative transfer DNA experimental design and qPCR assay to identify primary, secondary, and tertiary DNA transfer.

McCrane SM, Mulligan CJ.

J Forensic Sci. 2023 Dec 18. doi: 10.1111/1556-4029.15444. Online ahead of print.

PMID: 38108622

Contribution of Common Genetic Variants to Risk of Early-Onset Ischemic Stroke.

Jaworek T, Xu H, Gaynor BJ, Cole JW, Rannikmae K, Stanne TM, Tomppo L, Abedi V, Amouyel P, Armstrong ND, Attia J, Bell S, Benavente OR, Boncoraglio GB, Butterworth A; Cervical Artery Dissections and Ischemic Stroke Patients (CADSIP) Consortium; Carcel-Marquez J, Chen Z, Chong M, Cruchaga C, Cushman M, Danesh J, Debette S, Duggan DJ, Durda JP, Engstrom G, Enzinger C, Faul JD, Fecteau NS, Fernandez-Cadenas I, Gieger C, Giese AK, Grewal RP, Grittner U, Havulinna AS, Heitsch L, Hochberg MC, Holliday E, Hu J, Ilinca A; INVENT Consortium; Irvin MR, Jackson RD, Jacob MA, Rabionet R, Jimenez-Conde J, Johnson JA, Kamatani Y, Kardia SLR, Koido M, Kubo M, Lange L, Lee JM, Lemmens R, Levi CR, Li J, Li L, Lin K, Lopez H, Luke S, Maguire J, McArdle PF, McDonough CW, Meschia JF, Metso T, Müller-Nurasyid M, O’Connor TD, O’Donnell M, Peddareddygari LR, Pera J, Perry JA, Peters A, Putaala J, Ray D, Rexrode K, Ribases M, Rosand J, Rothwell PM, Rundek T, Ryan KA, Sacco RL, Salomaa V, Sanchez-Mora C, Schmidt R, Sharma P, Slowik A, Smith JA, Smith NL, Wassertheil-Smoller S, Söderholm M, Stine OC, Strbian D, Sudlow CLM, Tatlisumak T, Terao C, Thijs V, Torres-Aguila NP, Trégouët DA, Tuladhar AM, Veldink JH, Walters RG, Weir DR, Woo D, Worrall BB, Hong CC, Ross OA, Zand R, Leeuw FE, Lindgren AG, Pare G, Anderson CD, Markus HS, Jern C, Malik R, Dichgans M, Mitchell BD, Kittner SJ; Early Onset Stroke Genetics Consortium of the International Stroke Genetics Consortium (ISGC).

Neurology. 2022 Oct 17;99(16):e1738-e1754. doi: 10.1212/WNL.0000000000201006.

PMID: 36240095

Remimazolam Sedation and Neuraxial Anesthesia in a Patient with Amyotrophic Lateral Sclerosis Undergoing an Open Colectomy: A Case Report.

Nimma S, Gans A, Wardhan R, Allen W.

A A Pract. 2023 Dec 18;17(12):e01733. doi: 10.1213/XAA.0000000000001733. eCollection 2023 Dec 1.

PMID: 38109186

The panzootic potential of SARS-CoV-2.

Mabry ME, Fanelli A, Mavian C, Lorusso A, Manes C, Soltis PS, Capua I.

Bioscience. 2023 Dec 18;73(11):814-829. doi: 10.1093/biosci/biad102. eCollection 2023 Nov.

PMID: 38125826

The Snf5-Hsf1 transcription module synergistically regulates stress responses and pathogenicity by maintaining ROS homeostasis in Sclerotinia sclerotiorum.

Xiao K, Liu L, He R, Rollins JA, Li A, Zhang G, He X, Wang R, Liu J, Zhang X, Zhang Y, Pan H.