UFGI Publication Round-Up: Week of 12/16/24

UFGI Publication Round-Up: Week of 12/16/24

Disagreement on foundational principles of biological aging.

Gladyshev VN, Anderson B, Barlit H, Barré B, Beck S, Behrouz B, Belsky DW, Chaix A, Chamoli M, Chen BH, Cheng K, Chuprin J, Churchill GA, Cipriano A, Colville A, Deelen J, Deigin Y, Edmonds KK, English BW, Fang R, Florea M, Gershteyn IM, Gill D, Goetz LH, Gorbunova V, Griffin PT, Horvath S, Borch Jensen M, Jin X, Jovanovska S, Kajderowicz KM, Kasahara T, Kerepesi C, Kulkarni S, Labunskyy VM, Levine ME, Libert S, Lu JY, Lu YR, Marioni RE, McCoy BM, Mitchell W, Moqri M, Nasirian F, Niimi P, Oh HS, Okundaye B, Parkhitko AA, Peshkin L, Petljak M, Poganik JR, Pridham G, Promislow DEL, Prusisz W, Quiniou M, Raj K, Richard D, Ricon JL, Rutledge J, Scheibye-Knudsen M, Schork NJ, Seluanov A, Shadpour M, Shindyapina AV, Shuken SR, Sivakumar S, Stoeger T, Sugiura A, Sutton NR, Suvorov A, Tarkhov AE, Teeling EC, Trapp A, Tyshkovskiy A, Unfried M, Ward-Caviness CK, Yim SH, Ying K, Yunes J, Zhang B, Zhavoronkov A.

PNAS Nexus. 2024 Dec 3;3(12):pgae499. doi: 10.1093/pnasnexus/pgae499. eCollection 2024 Dec.

PMID: 39660064

Robust and flexible learning of a high-dimensional classification rule using auxiliary outcomes.

Liang M, Park J, Lu Q, Zhong X.

Biometrics. 2024 Oct 3;80(4):ujae144. doi: 10.1093/biomtc/ujae144.

PMID: 39671275

The core circadian clock factor, Bmal1, transduces sex-specific differences in both rhythmic and non-rhythmic gene expression in the mouse heart.

Zhang X, Procopio SB, Ding H, Semel MG, Schroder EA, Viggars MR, Seward TS, Du P, Wu K, Johnson SR, Prabhat A, Schneider DJ, Stumpf IG, Rozmus ER, Huo Z, Delisle BP, Esser KA.

Function (Oxf). 2024 Dec 10:zqae053. doi: 10.1093/function/zqae053. Online ahead of print.

PMID: 39658371

39657789

The economic impact of purulent vaginal discharge in dairy herds within a single lactation.

Ojeda-Rojas OA, Pérez-Báez J, Casaro S, Chebel RC, Cunha F, De Vries A, Santos JEP, Lima FS, Pinedo P, Schuenemann GM, Bicalho RC, Gilbert RO, Rodriguez-Zas S, Seabury CM, Rosa G, Thatcher WW, Galvão KN.

J Dairy Sci. 2024 Dec 9:S0022-0302(24)01345-6. doi: 10.3168/jds.2024-24897. Online ahead of print.

PMID: 39662820

Birth season affects cow longevity.

Toledo IM, Cattaneo L, Santos JEP, Dahl GE.

JDS Commun. 2024 May 31;5(6):674-678. doi: 10.3168/jdsc.2024-0590. eCollection 2024 Nov.

PMID: 39650035

Designing host-associated microbiomes using the consumer/resource model.

Plata G, Srinivasan K, Krishnamurthy M, Herron L, Dixit P.

mSystems. 2024 Dec 9:e0106824. doi: 10.1128/msystems.01068-24. Online ahead of print.

PMID: 39651880

Genome-wide evaluation of gene editing outcomes using CRISPR/Cas9 in seed propagated Camelina sativa and vegetatively propagated Solanum tuberosum.

Jayakody TB, Zarka D, Cho KH, Jensen J, Sikora S, Buell CR, Douches DS, Nadakuduti SS.

Front Plant Sci. 2024 Nov 26;15:1496861. doi: 10.3389/fpls.2024.1496861. eCollection 2024.

PMID: 39659410

Genomic insights into two new subspecies of Herbaspirillum huttiense strains isolated from diseased foliage in Florida.

Poudel M, Sharma A, Minsavage GV, Fullem K, Huguet-Tapia J, Norman DJ, Goss EM, Harmon CL, Jones JB.

Int J Syst Evol Microbiol. 2024 Dec;74(12):006597. doi: 10.1099/ijsem.0.006597.

PMID: 39671244

Rapid and efficient in planta genome editing in sorghum using foxtail mosaic virus-mediated sgRNA delivery.

Baysal C, Kausch AP, Cody JP, Altpeter F, Voytas DF.

Plant J. 2024 Dec 11. doi: 10.1111/tpj.17196. Online ahead of print.

PMID: 39661735

Erucic acid utilization by Lactobacillus johnsonii N6.2.

Thompson SC, Beliakoff R, Garrett TJ, Gonzalez CF, Lorca GL.

Front Microbiol. 2024 Nov 25;15:1476958. doi: 10.3389/fmicb.2024.1476958. eCollection 2024.

PMID: 39654680

C9orf72 repeat expansion creates the unstable folate-sensitive fragile site FRA9A.

Mirceta M, Schmidt MHM, Shum N, Prasolava TK, Meikle B, Lanni S, Mohiuddin M, McKeever PM, Zhang M, Liang M, van der Werf I, Scheers S, Dion PA, Wang P, Wilson MD, Abell T, Philips EA, Sznajder ŁJ, Swanson MS, Mehkary M, Khan M, Yokoi K, Jung C, de Jong PJ, Freudenreich CH, McGoldrick P, Yuen RKC, Abrahão A, Keith J, Zinman L, Robertson J, Rogaeva E, Rouleau GA, Kooy RF, Pearson CE.

NAR Mol Med. 2024 Nov 12;1(4):ugae019. doi: 10.1093/narmme/ugae019. eCollection 2024 Oct.

PMID: 39669124

The impact of the US election on diabetes.

Hirsch IB, Schatz DA.

Lancet Diabetes Endocrinol. 2024 Dec 9:S2213-8587(24)00370-X. doi: 10.1016/S2213-8587(24)00370-X. Online ahead of print.

PMID: 39667374

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