UFGI Publication round-up week 4/13/20

Valentine-King MA, Cisneros K, James MO, Huigens RW 3rd, Brown MB.

BMC Vet Res. 2020 Apr 6;16(1):107. doi: 10.1186/s12917-020-02324-4.

PMID: 32252763

Portable Nanopore Analytics: Are We There Yet?

Oliva M, Milicchio F, King K, Benson G, Boucher C, Prosperi M.

Bioinformatics. 2020 Apr 11. pii: btaa237. doi: 10.1093/bioinformatics/btaa237. [Epub ahead of print]

PMID: 32277811

The global spread of 2019-nCoV: a molecular evolutionary analysis.

Benvenuto D, Giovanetti M, Salemi M, Prosperi M, De Flora C, Junior Alcantara LC, Angeletti S, Ciccozzi M.

Pathog Glob Health. 2020 Mar;114(2):64-67. doi: 10.1080/20477724.2020.1725339. Epub 2020 Feb 12.

PMID: 32048560

Genomic Dissection of Anthracnose (Colletotrichum sublineolum) Resistance Response in Sorghum Differential Line SC112-14.

Cruet-Burgos CM, Cuevas HE, Prom LK, Knoll JE, Stutts LR, Vermerris W.

G3 (Bethesda). 2020 Apr 9;10(4):1403-1412. doi: 10.1534/g3.120.401121.

PMID: 32102832

Antineoplastic Agents: Environmental Prevalence and Adverse Outcomes in Aquatic Organisms.

Wormington AM, De María M, Kurita HG, Bisesi JH Jr, Denslow ND, Martyniuk CJ.

Environ Toxicol Chem. 2020 Apr 7. doi: 10.1002/etc.4687. [Epub ahead of print] Review.

PMID: 32266737

The pyrethroid esfenvalerate induces hypoactivity and decreases dopamine transporter expression in embryonic/larval zebrafish (Danio rerio).

Wang XH, Souders CL 2nd, Xavier P, Li XY, Yan B, Martyniuk CJ.

Chemosphere. 2020 Mar;243:125416. doi: 10.1016/j.chemosphere.2019.125416. Epub 2019 Nov 22.

PMID: 31995874

Carvacrol loaded nanostructured lipid carriers as a promising parenteral formulation for leishmaniasis treatment.

Galvão JG, Santos RL, Silva ARST, Santos JS, Costa AMB, Chandasana H, Neto VVA, Santos ECT, Lira AAM, Dolabella S, Scher R, Kima PE, Derendorf H, Nunes RS.

Eur J Pharm Sci. 2020 Apr 6:105335. doi: 10.1016/j.ejps.2020.105335. [Epub ahead of print]

PMID: 32272211

Anthracnose in U.S. Tea: Pathogen Characterization and Susceptibility Among Six Tea Accessions.

Orrock JM, Rathinasabapathi B, Spakes Richter B.

Plant Dis. 2020 Apr;104(4):1055-1059. doi: 10.1094/PDIS-07-19-1518-RE. Epub 2020 Feb 5.

PMID: 32027569

Comparative phylogenetics of Papilio butterfly wing shape and size demonstrates independent hindwing and forewing evolution.

Owens HL, Lewis DS, Condamine FL, Kawahara AY, Guralnick RP.

Syst Biol. 2020 Apr 7. pii: syaa029. doi: 10.1093/sysbio/syaa029. [Epub ahead of print]

PMID: 32259252

Site-Directed Mutagenesis Improves the Transduction Efficiency of Capsid Library-Derived Recombinant AAV Vectors.

Ran G, Chen X, Xie Y, Zheng Q, Xie J, Yu C, Pittman N, Qi S, Yu FX, Agbandje-McKenna M, Srivastava A, Ling C.

Mol Ther Methods Clin Dev. 2020 Mar 13;17:545-555. doi: 10.1016/j.omtm.2020.03.007. eCollection 2020 Jun 12.

PMID: 32258217

Insights through Genetics of Halophilic Microorganisms and Their Viruses.

Montalvo-Rodríguez R, Maupin-Furlow JA.

Genes (Basel). 2020 Apr 2;11(4). pii: E388. doi: 10.3390/genes11040388.

PMID: 32252451

Enhanced Transduction of Human Hematopoietic Stem Cells by AAV6 Vectors: Implications in Gene Therapy and Genome Editing.

Yang H, Qing K, Keeler GD, Yin L, Mietzsch M, Ling C, Hoffman BE, Agbandje-McKenna M, Tan M, Wang W, Srivastava A.

Mol Ther Nucleic Acids. 2020 Mar 29;20:451-458. doi: 10.1016/j.omtn.2020.03.009. [Epub ahead of print]

PMID: 32276210

Site-Directed Mutagenesis Improves the Transduction Efficiency of Capsid Library-Derived Recombinant AAV Vectors.

Ran G, Chen X, Xie Y, Zheng Q, Xie J, Yu C, Pittman N, Qi S, Yu FX, Agbandje-McKenna M, Srivastava A, Ling C.

Mol Ther Methods Clin Dev. 2020 Mar 13;17:545-555. doi: 10.1016/j.omtm.2020.03.007. eCollection 2020 Jun 12.

PMID: 32258217

Comparison of SNP Calling Pipelines and NGS Platforms to Predict the Genomic Regions Harboring Candidate Genes for Nodulation in Cultivated Peanut.

Peng Z, Zhao Z, Clevenger JP, Chu Y, Paudel D, Ozias-Akins P, Wang J.

Front Genet. 2020 Mar 24;11:222. doi: 10.3389/fgene.2020.00222. eCollection 2020.

PMID: 32265983

Actions of colony stimulating factor 3 on the maturing oocyte and developing embryo in cattle.

Jannaman EA, Xiao Y, Hansen PJ.

J Anim Sci. 2020 Apr 11. pii: skaa115. doi: 10.1093/jas/skaa115. [Epub ahead of print]

PMID: 32277240

Disruption of an adenylate-forming reductase required for conidiation, increases virulence of the insect pathogenic fungus Metarhizium acridum by enhancing cuticle invasion.

Guo H, Wang H, Keyhani NO, Xia Y, Peng G.

Pest Manag Sci. 2020 Feb;76(2):758-768. doi: 10.1002/ps.5576. Epub 2019 Sep 3.

PMID: 31392798

Commercially Available Insulin Products Demonstrate Stability Throughout the Cold Supply Chain Across the United States.

Garrett TJ, Atkinson P, Quinlivan EP, Ang L, Hirsch IB, Laffel L, Pietropaolo M, Haller MJ, Atkinson MA.

Diabetes Care. 2020 Apr 9. pii: dc191941. doi: 10.2337/dc19-1941. [Epub ahead of print]

PMID: 32273273

The evolution of autotomy in leaf-footed bugs.

Emberts Z, St Mary CM, Howard CC, Forthman M, Bateman PW, Somjee U, Hwang WS, Li D, Kimball RT, Miller CW.

Evolution. 2020 Apr 8. doi: 10.1111/evo.13948. [Epub ahead of print]

PMID: 32267543

Long-term reproductive success is predicted by sexual behavior and impaired by temporary nutritional stress during sexual maturation.

Wilner D, Greenway Ginny EV, Cirino LA, Miller CW.

Behav Processes. 2020 Apr 4:104122. doi: 10.1016/j.beproc.2020.104122. [Epub ahead of print]

PMID: 32259623

Physiological Changes in Mesembryanthemum crystallinum During the C₃ to CAM Transition Induced by Salt Stress.

Guan Q, Tan B, Kelley TM, Tian J, Chen S.

Front Plant Sci. 2020 Mar 17;11:283. doi: 10.3389/fpls.2020.00283. eCollection 2020.

PMID: 32256510

Whole genome detection of sequence and structural polymorphism in six diverse horses.

Al Abri MA, Holl HM, Kalla SE, Sutter NB, Brooks SA.

PLoS One. 2020 Apr 9;15(4):e0230899. doi: 10.1371/journal.pone.0230899. eCollection 2020.

PMID: 32271776

Microglia senescence occurs in both substantia nigra and ventral tegmental area.

Shaerzadeh F, Phan L, Miller D, Dacquel M, Hachmeister W, Hansen C, Bechtle A, Tu D, Martcheva M, Foster TC, Kumar A, Streit WJ, Khoshbouei H.

Glia. 2020 Apr 10. doi: 10.1002/glia.23834. [Epub ahead of print]

PMID: 32275335

Carvacrol loaded nanostructured lipid carriers as a promising parenteral formulation for leishmaniasis treatment.

Galvão JG, Santos RL, Silva ARST, Santos JS, Costa AMB, Chandasana H, Neto VVA, Santos ECT, Lira AAM, Dolabella S, Scher R, Kima PE, Derendorf H, Nunes RS.

Eur J Pharm Sci. 2020 Apr 6:105335. doi: 10.1016/j.ejps.2020.105335. [Epub ahead of print]

PMID: 32272211

HLA-B*14:01 and HLA-B*35:01 are associated with trimethoprim-sulfamethoxazole induced liver injury.

Li YJ, Phillips E, Dellinger A, Nicoletti P, Schutte R, Li D, Ostrov DA, Fontana RJ, Watkins PB, Stolz A, Daly AK, Aithal GP, Barnhart H, Chalasani N; Drug-induced Liver Injury Network (DILIN).

Hepatology. 2020 Apr 9. doi: 10.1002/hep.31258. [Epub ahead of print]

PMID: 32270503

Super resolution convolutional neural network for feature extraction in spectroscopic data.

Peng H, Gao X, He Y, Li Y, Ji Y, Liu C, Ekahana SA, Pei D, Liu Z, Shen Z, Chen Y.

Rev Sci Instrum. 2020 Mar 1;91(3):033905. doi: 10.1063/1.5132586.

PMID: 32259998