UFGI Publication round-up week 2/17/20
Limdi NA, Cavallari LH, Lee CR, Hillegass WB, Holmes AM, Skaar TC, Pisu M, Dillon C, Beitelshees AL, Empey PE, Duarte JD, Diaby V, Gong Y, Johnson JA, Graves J, Garbett S, Zhou Z, Peterson JF; Implementing GeNomics In pracTicE (IGNITE) Network Pharmacogenetic Working Group (IGNITE-PGx).
Pharmacogenomics J. 2020 Feb 11. doi: 10.1038/s41397-020-0162-5. [Epub ahead of print]
PMID: 32042096
MYCN amplification and ATRX mutations are incompatible in neuroblastoma.
Zeineldin M, Federico S, Chen X, Fan Y, Xu B, Stewart E, Zhou X, Jeon J, Griffiths L, Nguyen R, Norrie J, Easton J, Mulder H, Yergeau D, Liu Y, Wu J, Van Ryn C, Naranjo A, Hogarty MD, Kamiński MM, Valentine M, Pruett-Miller SM, Pappo A, Zhang J, Clay MR, Bahrami A, Vogel P, Lee S, Shelat A, Sarthy JF, Meers MP, George RE, Mardis ER, Wilson RK, Henikoff S, Downing JR, Dyer MA.
Nat Commun. 2020 Feb 14;11(1):913. doi: 10.1038/s41467-020-14682-6.
PMID: 32060267
Li X, Yang Y, Zhao H, Zhu T, Yang Z, Xu H, Fu Y, Lin F, Pan X, Li L, Cui C, Hong M, Yang L, Wang KK, Tan W.
J Am Chem Soc. 2020 Feb 11. doi: 10.1021/jacs.9b11490. [Epub ahead of print]
PMID: 31991082
Singh MD, Jensen M, Lasser M, Huber E, Yusuff T, Pizzo L, Lifschutz B, Desai I, Kubina A, Yennawar S, Kim S, Iyer J, Rincon-Limas DE, Lowery LA, Girirajan S.
PLoS Genet. 2020 Feb 13;16(2):e1008590. doi: 10.1371/journal.pgen.1008590. [Epub ahead of print]
PMID: 32053595
Zhou J, Sun X, Yang L, Wang L, Ran G, Wang J, Cao Q, Wu L, Bryant A, Ling C, Pi L.
FASEB J. 2020 Feb 14. doi: 10.1096/fj.201902382R. [Epub ahead of print]
PMID: 32057145
The uncharacterized gene EVE contributes to vessel element dimensions in Populus.
Ribeiro CL, Conde D, Balmant KM, Dervinis C, Johnson MG, McGrath AP, Szewczyk P, Unda F, Finegan CA, Schmidt HW, Miles B, Drost DR, Novaes E, Gonzalez-Benecke CA, Peter GF, Burleigh JG, Martin TA, Mansfield SD, Chang G, Wickett NJ, Kirst M.
Proc Natl Acad Sci U S A. 2020 Feb 10. pii: 201912434. doi: 10.1073/pnas.1912434117. [Epub ahead of print]
PMID: 32041869
Environmental Triggers of lrgA Expression in Streptococcus mutans.
Ishkov IP, Ahn SJ, Rice KC, Hagen SJ.
Front Microbiol. 2020 Jan 28;11:18. doi: 10.3389/fmicb.2020.00018. eCollection 2020.
PMID: 32047487
Immune protection is dependent on the gut microbiome in a lethal mouse gammaherpesviral infection.
Yaron JR, Ambadapadi S, Zhang L, Chavan RN, Tibbetts SA, Keinan S, Varsani A, Maldonado J, Kraberger S, Tafoya AM, Bullard WL, Kilbourne J, Stern-Harbutte A, Krajmalnik-Brown R, Munk BH, Koppang EO, Lim ES, Lucas AR.
Sci Rep. 2020 Feb 11;10(1):2371. doi: 10.1038/s41598-020-59269-9.
PMID: 32047224
Fontana C, Angeletti S, Mirandola W, Cella E, Alessia L, Zehender G, Favaro M, Leoni D, Rose DD, Gherardi G, Florio L, Salemi M, Andreoni M, Sarmati L, Ciccozzi M.
Future Microbiol. 2020 Feb 14. doi: 10.2217/fmb-2019-0074.
PMID: 32056447
The global spread of 2019-nCoV: a molecular evolutionary analysis.
Benvenuto D, Giovanetti M, Salemi M, Prosperi M, De Flora C, Junior Alcantara LC, Angeletti S, Ciccozzi M.
Pathog Glob Health. 2020 Feb 12:1-4. doi: 10.1080/20477724.2020.1725339. [Epub ahead of print]
PMID: 32048560
Golas G, Jang SJ, Naik NG, Alonso JD, Papp B, Toth Z.
Virology. 2020 Feb;541:160-173. doi: 10.1016/j.virol.2019.12.011. Epub 2019 Dec 30.
PMID: 32056714
Archaeosine modification of archaeal tRNA – a role in structural stabilization.
Turner B, Burkhart BW, Weidenbach K, Ross R, Limbach PA, Schmitz RA, de Crécy-Lagard V, Stedman KM, Santangelo TJ, Iwata-Reuyl D.
J Bacteriol. 2020 Feb 10. pii: JB.00748-19. doi: 10.1128/JB.00748-19. [Epub ahead of print]
PMID: 32041795
Axially-Chiral Cannabinols: A New Platform for Cannabinoid-Inspired Drug Discovery.
Grenning AJ, Navaratne PV, Wilkerson JL, Ranasinghe KD, Semenova E, Felix JS, Ghiviriga I, Roitberg A, McMahon LR.
ChemMedChem. 2020 Feb 15. doi: 10.1002/cmdc.202000025. [Epub ahead of print]
PMID: 32061146
Ference CM, Manthey JA, Narciso JA, Jones JB, Baldwin EA.
Phytopathology. 2020 Feb;110(2):287-296. doi: 10.1094/PHYTO-06-19-0219-R. Epub 2020 Jan 5.
PMID: 31713458
Natural selection and repeated patterns of molecular evolution following allopatric divergence.
Dong Y, Chen S, Cheng S, Zhou W, Ma Q, Chen Z, Fu CX, Liu X, Zhao YP, Soltis PS, Wong GK, Soltis DE, Xiang QJ.
Elife. 2019 Aug 2;8. pii: e45199. doi: 10.7554/eLife.45199.
PMID: 31373555
Campbell SM, Sims CA, Bartoshuk LM, Colquhoun TA, Schwieterman ML, Folta KM.
J Food Sci. 2020 Feb 11. doi: 10.1111/1750-3841.15044. [Epub ahead of print]
PMID: 32043600
The global spread of 2019-nCoV: a molecular evolutionary analysis.
Benvenuto D, Giovanetti M, Salemi M, Prosperi M, De Flora C, Junior Alcantara LC, Angeletti S, Ciccozzi M.
Pathog Glob Health. 2020 Feb 12:1-4. doi: 10.1080/20477724.2020.1725339. [Epub ahead of print]
PMID: 32048560
Comparison of Multivendor Single-Voxel MR Spectroscopy Data Acquired in Healthy Brain at 26 Sites.
Považan M, Mikkelsen M, Berrington A, Bhattacharyya PK, Brix MK, Buur PF, Cecil KM, Chan KL, Chen DYT, Craven AR, Cuypers K, Dacko M, Duncan NW, Dydak U, Edmondson DA, Ende G, Ersland L, Forbes MA, Gao F, Greenhouse I, Harris AD, He N, Heba S, Hoggard N, Hsu TW, Jansen JFA, Kangarlu A, Lange T, Lebel RM, Li Y, Lin CE, Liou JK, Lirng JF, Liu F, Long JR, Ma R, Maes C, Moreno-Ortega M, Murray SO, Noah S, Noeske R, Noseworthy MD, Oeltzschner G, Porges EC, Prisciandaro JJ, Puts NAJ, Roberts TPL, Sack M, Sailasuta N, Saleh MG, Schallmo MP, Simard N, Stoffers D, Swinnen SP, Tegenthoff M, Truong P, Wang G, Wilkinson ID, Wittsack HJ, Woods AJ, Xu H, Yan F, Zhang C, Zipunnikov V, Zöllner HJ, Edden RAE, Barker PB.
Radiology. 2020 Feb 11:191037. doi: 10.1148/radiol.2020191037. [Epub ahead of print]
PMID: 32043950
An in vivo brain-bacteria interface: the developing brain as a key regulator of innate immunity.
Herrera-Rincon C, Paré JF, Martyniuk CJ, Jannetty SK, Harrison C, Fischer A, Dinis A, Keshari V, Novak R, Levin M.
NPJ Regen Med. 2020 Feb 4;5:2. doi: 10.1038/s41536-020-0087-2. eCollection 2020.
PMID: 32047653