UFGI Publication Round-Up: Week of 8/11/2025

Weng YM, Martinez JI, Markee A, Plotkin D, Sondhi Y, Mongue AJ, Frandsen PB, Kawahara AY.

Genome Biol Evol. 2025 Aug 12:evaf156. doi: 10.1093/gbe/evaf156. Online ahead of print.

PMID: 40796329

Bisphenol TMC disturbs mitochondrial activity and biogenesis, reducing lifespan and healthspan in the nematode Caenorhabditis elegans.

Rathor L, Lee HJ, McElroy T, Beck S, Bailey J, Sheng Y, Wohlgemuth S, Kim SH, Kim HH, Xiao R, Heo JD, Han SM, Hyun M.

Ecotoxicol Environ Saf. 2025 Aug 9;303:118794. doi: 10.1016/j.ecoenv.2025.118794. Online ahead of print.

PMID: 40784098

AAV9 Gene Therapy in GM1 Gangliosidosis Type II: A Phase 1/2 Trial.

Lewis CJ, D’Souza P, Johnston JM, Acosta MT, Farmer C, Baker EH, Crowell A, Mojica Y, Rahman S, Joseph L, Hartman A, Vézina G, Quezado Z, Yousef MH, Luckett A, Vardar Z, Shazeeb MS, Corti M, Blackwood M, Coleman K, Thurm A, De Boever E, Gahl WA, Byrne BJ, Flotte TR, Jiang X, Gross AL, Keeler AM, Gray-Edwards H, Martin DR, Sena-Esteves M, Tifft CJ.

medRxiv [Preprint]. 2025 Jul 29:2025.07.28.25332074. doi: 10.1101/2025.07.28.25332074.

PMID: 40766118

What to consider when developing a new molecular HIV surveillance tool: Perspectives of key stakeholders working in HIV prevention and treatment.

Canidate SS, Gracy HR, McIntosh S, Liu Y, Fisk-Hoffman R, Rich S, Mavian C, Cook RL, Prosperi M, Salemi M.

Proc (IEEE Int Conf Healthc Inform). 2025 Jun;2025:588-597. doi: 10.1109/ichi64645.2025.00072. Epub 2025 Jul 22.

PMID: 40814302

HLA-B Alleles with Shared Peptide Binding Specificities Define Global Risk of Co-trimoxazole-induced SCAR.

Li Y, Gibson A, Saeed HN, Tahboub MA, Li D, Ostrov DA, Krantz MS, Mallal SA, Alves E, Chopra A, Choo L, Dodiuk-Gad RP, Kaffenberger B, Drucker AM, Goh MS, Ergen E, Micheletti R, Rosenbach M, Martin-Pozo MD, Gangula R, Williams EA, Yu A, O’Connor A, Mahan K, Kwan JT, Metcalfe D, Rashad R, Shanbhag SS, Pedretti S, Choshi P, Chimbetete T, Selim R, James I, Trubiano JA, Lehloenya R, Peter JG, Phillips EJ; SJS Survivor Study.

J Allergy Clin Immunol Pract. 2025 Aug 8:S2213-2198(25)00762-7. doi: 10.1016/j.jaip.2025.08.001. Online ahead of print.

PMID: 40784610

A lncRNA drives developmentally-timed decay of all members of an essential microRNA family.

Grimme AL, Li L, Scholl A, Donnelly BF, Channamraju N, Vieux KF, Zhou L, Seydoux G, Xie M, McJunkin K.

bioRxiv [Preprint]. 2025 Jul 31:2025.07.30.667716. doi: 10.1101/2025.07.30.667716.

PMID: 40766674

Exercise training remodels inter-organ endocrine networks.

Ahn C, Hevener AL, Goodyear LJ, Bodine SC, Esser KA, Seldin MM, Sparks LM.

Mol Metab. 2025 Sep;99:102219. doi: 10.1016/j.molmet.2025.102219. Epub 2025 Jul 21.

PMID: 40701293

Alterations of the skeletal muscle nuclear proteome after acute exercise reveals a post-transcriptional influence.

Martin RA, Zhang X, Viggars MR, Sanford JA, Taylor ZW, Hansen JR, Clair GC, Douglas CM, Hesketh SJ, Adkins JN, Esser KA.

Am J Physiol Cell Physiol. 2025 Aug 11. doi: 10.1152/ajpcell.00575.2024. Online ahead of print.

PMID: 40789650

Loss of a morph is associated with asymmetric character release in a radiation of woodland salamanders.

Waldron BP, Hantak MM, Watts EF, Uyeda JC, Lemmon AR, Lemmon EM, Guralnick RP, Blackburn DC, Kuchta SR.

Evolution. 2025 Aug 13:qpaf167. doi: 10.1093/evolut/qpaf167. Online ahead of print.

PMID: 40802472

Transcriptome alterations underlying metabolic dysfunction and liver disease in myotonic dystrophy type 1.

Fukumoto A, Yamanaka T, Yanaizu M, Nakamori M, Hama M, Yasumizu Y, Shiotsu K, Matsumura T, Nutter CA, Kubota T, Fujimura H, Kino Y, Swanson MS, Inoue K, Takahashi MP.

Hum Mol Genet. 2025 Aug 13:ddaf124. doi: 10.1093/hmg/ddaf124. Online ahead of print.

PMID: 40801161

Differential pathology and susceptibility to MBNL loss across muscles in myotonic dystrophy mouse models.

Davenport ML, Fong A, Montoya-Vazquez G, Alves de Moura MF, Bubenik JL, Swanson MS.

JCI Insight. 2025 Aug 14:e195836. doi: 10.1172/jci.insight.195836. Online ahead of print.

PMID: 40811031

Essential function of the integrator complex in Kaposi’s sarcoma-associated herpesvirus lytic replication.

Nguyen A, Li T, Traugot C, Paulsen K, Nelson TS, Xie M, Ma Z.

J Virol. 2025 Aug 13:e0026625. doi: 10.1128/jvi.00266-25. Online ahead of print.

PMID: 40801543

Total and Neutralizing Antibody Seroprevalence of Hepatotropic Adeno-Associated Virus Among Healthy and Hemophilia A or B Population from India.

Daniel HDJ, Farzana J, Kannangai R, Kumar S, Lakshmi KM, Jashal CB, Dhamne H, Lahoti V, Kanjwani D, Abraham A, Coleman K, Srivastava A, Srivastava A, Abraham AM.

Hum Gene Ther. 2025 Aug 11. doi: 10.1177/10430342251366208. Online ahead of print.

PMID: 40789666

Complete genome sequence of ceftazidime-resistant Burkholderia pseudomallei strain 490f reveals a complex long repeat region.

Khrongsee P, Subramaniam K, Mergia A, Tuanyok A.

Microbiol Resour Announc. 2025 Aug 11:e0056225. doi: 10.1128/mra.00562-25. Online ahead of print.

PMID: 40788156

Delayed Post-Traumatic Temporal Bone Encephalocele With Lateral Ventricle Herniation.

White C, Lee Y, Rahman M, Chen S.

Ear Nose Throat J. 2025 Aug 13:1455613251358577. doi: 10.1177/01455613251358577. Online ahead of print.

PMID: 40801288

Review of Acetazolamide and Novel Medical Paradigms for Idiopathic Intracranial Hypertension Treatment.

Lee Y, Adelman AE, Mejia-Vergara AJ, Buchowicz BE, Lobo BC, Justice JM, Chapurin N.

Ear Nose Throat J. 2025 Aug 13:1455613251358629. doi: 10.1177/01455613251358629. Online ahead of print.

PMID: 40801435

Differential causal networks highlight sex-based differences in human tissues.

Defilippo A, Glass K, Giorgi FM, Kahveci T, Veltri P, Guzzi PH.

Brief Bioinform. 2025 Jul 2;26(4):bbaf407. doi: 10.1093/bib/bbaf407.

PMID: 40794949

Sex and ethnicity in early-onset Alzheimer’s disease biomarkers and global function.

Asken BM, Wang WE, Arias F, Levy SA, Barker WW, Rosselli M, Cid RC, Marsiske M, Armstrong MJ, Vaillancourt DE, Loewenstein DA, Smith GE, Duara R.

Alzheimers Dement (Amst). 2025 Aug 12;17(3):e70157. doi: 10.1002/dad2.70157. eCollection 2025 Jul-Sep.

PMID: 40799840

Correction: Ashby et al. Femoral Structure and Biomechanical Characteristics in Sanfilippo Syndrome Type-B Mice. Int. J. Mol. Sci. 2023, 24, 13988.

Ashby FJ, Castillo EJ, Ludwig Y, Andraka NK, Chen C, Jamieson JC, Kabbej N, Sommerville JD, Aguirre JI, Heldermon CD.

Int J Mol Sci. 2025 Aug 1;26(15):7442. doi: 10.3390/ijms26157442.

PMID: 40806793

A 47-Year-Old Female With a Tubular, Nonenhancing Structure in the Left Lower Lobe.

Gomez Rojas O, Mathavan A, Mathavan A, Ataya A.

Chest. 2025 Aug;168(2):e35-e38. doi: 10.1016/j.chest.2025.02.037.

PMID: 40784706

Evo-Inspired Engineering of Radical Phenotypes and Emergent Traits.

Babonis LS, Hahn DA, Liu AP, Widhalm JR.

Integr Comp Biol. 2025 Aug 6:icaf107. doi: 10.1093/icb/icaf107. Online ahead of print.

PMID: 40795044

Microbiome composition and co-occurrence dynamics in wild Drosophila suzukii are influenced by host crop, fly sex, and sampling location.

Bhandari R, Wong AC-N, Lee JC, Boyd A, Shelby K, Ringbauer J Jr, Kang DS.

Microbiol Spectr. 2025 Aug 12:e0260824. doi: 10.1128/spectrum.02608-24. Online ahead of print.

PMID: 40793771

Microbiome drives age-dependent shifts in brain transcriptomic programs at the single-cell level in Drosophila.

Zhao D, Shiga RT, Song Z, Shu R, Loo L, Wong ACN.

NPJ Biofilms Microbiomes. 2025 Aug 12;11(1):162. doi: 10.1038/s41522-025-00781-z.

PMID: 40796784