UFGI Publication Round-Up: Week of 6/7/2025

Differential extracellular matrix proteomic signatures in colorectal tumors from Appalachian and non-Appalachian patients.

Sougiannis AT, Taylor HB, Zambrzycki SC, Conroy L, Strubler R, Edge C, Drake RR, Wallace K, Allison D, Lee E, Sun RC, Angel PM.

Oncol Lett. 2025 Jun 26;30(3):413. doi: 10.3892/ol.2025.15159. eCollection 2025 Sep.

PMID: 40630709

 

 

Fatty Acids and Inflammatory Protein Biomarkers From Coronavirus Disease 2019 Patients.

Bala N, Habib AH, Kozuch M, Denslow ND, Dhaliwal NS, Owings AH, Glover SC, Alli AA.

Immun Inflamm Dis. 2025 Jul;13(7):e70218. doi: 10.1002/iid3.70218.

PMID: 40626890

 

 

Surrounded: Inoculum sources of Colletotrichum gloeosporioides complex pathogens around Florida Ericales crops: tea, camellia, and blueberry.

Soltez K, Soltis DE, Spakes-Richter B.

Plant Dis. 2025 Jul 10. doi: 10.1094/PDIS-08-24-1643-RE. Online ahead of print.

PMID: 40637725

 

 

Risdiplam treatment following onasemnogene abeparvovec in individuals with spinal muscular atrophy: a multicenter case series.

Svoboda MD, Kuntz N, Leon-Astudillo C, Byrne BJ, Krueger J, Kwon JM, Sieburg C, Castro D.

BMC Neurol. 2025 Jul 7;25(1):283. doi: 10.1186/s12883-025-04276-4.

PMID: 40624473

 

 

Cardiac Transplantation Does Not Improve Exercise Tolerance, Muscle Mass, or Substrate Metabolism in Barth Syndrome.

Cade WT, Bohnert KL, Peterson LR, Fuentes LL, Poehlein E, Green CL, Pacak CA, Byrne BJ, Reeds DN, Bashir A, Feingold B, Taylor C.

JIMD Rep. 2025 Jul 7;66(4):e70034. doi: 10.1002/jmd2.70034. eCollection 2025 Jul.

PMID: 40626056

 

 

A comprehensive review on the neurobehavioural effects of bisphenol compounds and the underlying molecular mechanisms in zebrafish (Danio rerio).

Hasan AKMM, Martyniuk CJ, Niyogi S, Chivers DP.

Comp Biochem Physiol C Toxicol Pharmacol. 2025 Oct;296:110228. doi: 10.1016/j.cbpc.2025.110228. Epub 2025 May 18.

PMID: 40393573

 

 

Mechanistic insights into microplastic-induced reproductive toxicity in aquatic organisms: A comprehensive review.

Hasan AKMM, Hossain MF, Uddin M, Khan MT, Saif UM, Hamed M, Martyniuk CJ, Chivers DP.

Aquat Toxicol. 2025 Jul 1;286:107478. doi: 10.1016/j.aquatox.2025.107478. Online ahead of print.

PMID: 40651185

 

 

Nick sealing of polβ mismatch insertion products by LIG1 and LIG3α during 8-oxoG bypass leads to mutagenic or error-free base excision repair.

Lee KM, Castro E, Ratcliffe J, Lerner C, Çağlayan M.

J Biol Chem. 2025 Jun;301(6):108540. doi: 10.1016/j.jbc.2025.108540. Epub 2025 Apr 24.

PMID: 40286853

 

 

Scrutinizing Acalitus simplex Flechtmann et Etienne (Eriophyidae): an eriophyoid mite associated with Ruellia spp. (Acanthaceae).

De Giosa M, Ataide LMS, Dale AG, Hahn DA, Wu X, Ochoa R, Bolton S, Cloonan KR, Revynthi AM.

Exp Appl Acarol. 2025 Jul 9;95(2):13. doi: 10.1007/s10493-025-01040-8.

PMID: 40632355

 

 

Suppression of Aedes aegypti by the sterile insect technique on Captiva Island, Florida, USA from 2020 to 2022.

Morreale R, Carvalho DO, Stenhouse S, Bajonero J, Pereira R, Hahn DA, Lloyd A, Hoel DF.

PLoS Negl Trop Dis. 2025 Jul 11;19(7):e0013256. doi: 10.1371/journal.pntd.0013256. Online ahead of print.

PMID: 40644512

 

 

High-affinity CD16A polymorphism associated with reduced risk ofsevere COVID-19.

Qualls AE, Tsao T, Lui I, Lim SA, Su Y, Chen E, Duchen D, Maecker HT, Kim-Schulze S, Montgomery RR, Krammer F, Langelier CR, Levy O, Baden LR, Melamed E, Ehrlich LI, McComsey GA, Sekaly RP, Cairns CB, Haddad EK, Shaw AC, Hafler DA, Corry DB, Kheradmand F, Atkinson MA, Brakenridge SC, Higuita NIA, Metcalf JP, Hough CL, Messer WB, Pulendran B, Nadeau KC, Davis MM, Fernandez-Sesma A, Simon V, Kraft M, Bime C, Calfee CS, Erle DJ, Schaenmann J, Ozonoff A, Peters B, Kleinstein SH, Augustine AD, Diray-Arce J, Becker PM, Rouphael N; IMPACC Network; Goldman JD, Calabrese DR, Heath JR, Wells JA, Reed EF, Lanier LL, Pickering H, Aguilar OA.

JCI Insight. 2025 May 22;10(13):e191314. doi: 10.1172/jci.insight.191314. eCollection 2025 Jul 8.

PMID: 40402577

 

 

On the species identity of a tropical oyster (Bivalvia, Ostreidae, Dendostrea) invading the eastern Mediterranean Sea.

Oliver PG, Garzia M, Paulay G, Salvi D.

Zookeys. 2025 Jun 27;1243:207-224. doi: 10.3897/zookeys.1243.152856. eCollection 2025.

PMID: 40642435

 

 

Implementation of high-resolution sperm respirometry for modeling bull fertility.

de Agostini Losano JD, Ren J, Yue F, Daigneault BW.

J Anim Sci. 2025 Jan 4;103:skaf209. doi: 10.1093/jas/skaf209.

PMID: 40518747

 

 

Combined impact of semantic segmentation and quantitative structure modelling of Southern pine trees using terrestrial laser scanning.

Xia J, Martin TA, Peter GF, Brock KM, Atkins JW, Gitzendanner MA, Bueno I, Calders K, Corte APD, Hudak AT, Schlickmann MB, Andreu MG, Hamamura C, Klauberg C, Silva CA.

Sci Rep. 2025 Jul 8;15(1):24427. doi: 10.1038/s41598-025-09681-w.

PMID: 40628910

 

 

Synthetic feed-forward loop circuit boosts transgene expression in sugarcane.

Zhang Z, Anwar S, Yafuso EJ, Zuniga Soto ET, Li C, Luo G, Moose SP, Swaminathan K, Altpeter F, Hudson ME.

Plant Cell Rep. 2025 Jul 8;44(8):171. doi: 10.1007/s00299-025-03561-3.

PMID: 40627042

 

 

Biochemical properties of glycerol kinase from the hypersaline-adapted archaeon Haloferax volcanii.

Sanchez KM, Maupin-Furlow JA.

Appl Environ Microbiol. 2025 Jul 8:e0088625. doi: 10.1128/aem.00886-25. Online ahead of print.

PMID: 40626661

 

 

Outbreaks of Highly Pathogenic H5N1 Influenza A Virus infection in Black Vultures (Coragyps atratus), USA, 2022.

Cunningham MW, Brown J, Hardman R, Loerzel S, Kluever BM, Zachariah TT, Donnelly KA, Poulson RL, Nemeth NM, Van Why K, Sargent R, Driscoll CP, Tegeler AK, Zhou L, Guzman-Vargas V, Lenoch J, Ruder MG, Bommineni YR, Stallknecht DE.

J Wildl Dis. 2025 Jul 11. doi: 10.7589/JWD-D-24-00214. Online ahead of print.

PMID: 40639804

 

 

Neuro-immune crosstalk: focus on innate lymphoid cells.

Bostick JW, Zhou L.

Trends Immunol. 2025 Jul 11:S1471-4906(25)00162-0. doi: 10.1016/j.it.2025.06.005. Online ahead of print.

PMID: 40651882

 

 

Opposing roles for myeloid and smooth muscle cell STING in pulmonary hypertension.

Pham AT, Virk S, Oliveira AC, Alves MD, Fu C, Zhang Y, Alvarez-Castanon J, Lee BB, Lee KL, Mashina R, Ray KE, Donabedian P, Ebrahimi E, Patel H, Patel R, Lewis D, Huo Z, Karmouty-Quintana H, Chen L, Jin L, Bryant AJ.

JCI Insight. 2025 May 22;10(13):e184792. doi: 10.1172/jci.insight.184792. eCollection 2025 Jul 8.

PMID: 40402605

 

 

Fine-mapping genomic loci refines bipolar disorder risk genes.

Koromina M, Ravi A, Panagiotaropoulou G, Schilder BM, Humphrey J, Braun A, Bidgeli T, Chatzinakos C, Coombes BJ, Kim J, Liu X, Terao C, O’Connell KS, Adams MJ, Adolfsson R, Alda M, Alfredsson L, Andlauer TFM, Andreassen OA, Antoniou A, Baune BT, Bengesser S, Biernacka J, Boehnke M, Bosch R, Cairns MJ, Carr VJ, Casas M, Catts S, Cichon S, Corvin A, Craddock N, Dafnas K, Dalkner N, Dannlowski U, Degenhardt F, Di Florio A, Dikeos D, Fellendorf FT, Ferentinos P, Forstner AJ, Forty L, Frye M, Fullerton JM, Gawlik M, Gizer IR, Gordon-Smith K, Green MJ, Grigoroiu-Serbanescu M, Guzman-Parra J, Hahn T, Henskens F, Hillert J, Jablensky AV, Jones L, Jones I, Jonsson L, Kelsoe JR, Kircher T, Kirov G, Kittel-Schneider S, Kogevinas M, Landén M, Leboyer M, Lenger M, Lissowska J, Lochner C, Loughland C, MacIntyre DJ, Martin NG, Maratou E, Mathews CA, Mayoral F, McElroy SL, McGregor NW, McIntosh A, McQuillin A, Michie P, Mitchell PB, Moutsatsou P, Mowry B, Müller-Myhsok B, Myers RM, Nenadić I, Nievergelt CM, Nöthen MM, Nurnberger J, ‘Donovan MO, ‘Donovan CO, Ophoff RA, Owen MJ, Pantelis C, Pato C, Pato MT, Patrinos GP, Pawlak JM, Perlis RH, Porichi E, Posthuma D, Ramos-Quiroga JA, Reif A, Reininghaus EZ, Ribasés M, Rietschel M, Schall U, Schofield PR, Schulze TG, Scott L, Scott RJ, Serretti A, Smoller JW, Świątkowska B, Soler Artigas M, Stein DJ, Streit F, Toma C, Tooney P, Vawter MP, Vieta E, Vincent JB, Waldman ID, Weickert CS, Weickert T, Witt SH, Hong KS, Ikeda M, Iwata N, Won HH, Edenberg HJ, Ripke S, Raj T, Coleman JRI, Mullins N.

Nat Neurosci. 2025 Jul;28(7):1393-1403. doi: 10.1038/s41593-025-01998-z. Epub 2025 Jun 25.

PMID: 40562893

 

 

Classification of hoarding and comorbid neuropsychiatric symptoms.

Nutley SK, Striley CW, Cottler LB, Eichenbaum J, Nosheny RL, Mackin RS, Mathews CA.

Psychiatry Res Commun. 2025 Jun;5(2):100215. doi: 10.1016/j.psycom.2025.100215. Epub 2025 May 21.

PMID: 40642755

 

 

Illuminating Glucomannan Synthases To Explore Cell Wall Synthesis Bottlenecks.

Grieß-Osowski A, Robert M, Qiande M, Clauss S, Voiniciuc C.

ACS Synth Biol. 2025 Jul 8. doi: 10.1021/acssynbio.5c00181. Online ahead of print.

PMID: 40627154

 

 

antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation.

Blin K, Shaw S, Vader L, Szenei J, Reitz ZL, Augustijn HE, Cediel-Becerra JDD, de Crécy-Lagard V, Koetsier RA, Williams SE, Cruz-Morales P, Wongwas S, Segurado Luchsinger AE, Biermann F, Korenskaia A, Zdouc MM, Meijer D, Terlouw BR, van der Hooft JJJ, Ziemert N, Helfrich EJN, Masschelein J, Corre C, Chevrette MG, van Wezel GP, Medema MH, Weber T.

Nucleic Acids Res. 2025 Jul 7;53(W1):W32-W38. doi: 10.1093/nar/gkaf334.

PMID: 40276974

 

 

Targeted genome mining for natural product discovery.

Cediel-Becerra JDD, Chevrette MG.

Methods Enzymol. 2025;717:267-298. doi: 10.1016/bs.mie.2025.03.005. Epub 2025 Apr 15.

PMID: 40651827

 

 

Loss of Paired Weapons Leads to Larger Testes and a Lighter Load for Dispersal.

Boothroyd JC, Smit SM, Zlotnik NS, Miller CW.

Ecol Evol. 2025 Jul 6;15(7):e71724. doi: 10.1002/ece3.71724. eCollection 2025 Jul.

PMID: 40625313

 

 

Association Between Area Deprivation Index and Narcotic Prescriptions, Wound Complications, and Reoperation Rates after Soft Tissue Hand and Wrist Surgery.

Tabarestani A, Foreman M, Dada O, Hao KA, Hones KM, Khlopas A, Kim J, Wright TW.

J Hand Microsurg. 2025 Jun 22;17(5):100300. doi: 10.1016/j.jham.2025.100300. eCollection 2025 Sep.

PMID: 40620863

 

 

Caffeine removal in wastewater: a comprehensive review of current treatment plants and small-scale innovations.

Yang Y, Wan Y, Chen H, Li Y, Muñoz-Carpena R, Zheng Y, Huang J, Zhang Y, Gao B.

Environ Tech Rev. 2025;14(1):594-612. doi: 10.1080/21622515.2025.2512483. Epub 2025 Jun 6.

PMID: 40642205

 

 

Comparative Efficacy of Pharmacological Interventions for Heart Failure with Reduced Ejection Fraction Between Asian and White Patients: A Meta-analysis of Randomized Controlled Trials.

Huang W, Tang H, Li Y, Chen WH, Chang SH, Bian J, Ahmed MM, Kimmel SE, Guo J.

Am J Cardiovasc Drugs. 2025 Jul 11. doi: 10.1007/s40256-025-00745-w. Online ahead of print.

PMID: 40643788