UFGI Publication Round-Up: Week of 6/23/2025

Ismail HM, Cuthbertson D, Galderisi A, Libman I, Jacobsen L, Moran A, Petrelli A, Atkinson M, Redondo MJ, Hannon T, Mather KJ, Sosenko JM.

Diabetes. 2025 Jul 1;74(7):1196-1204. doi: 10.2337/db24-1000.

PMID: 40173211

Ball-Milled Spent Coffee Ground Biochar Effectively Removes Caffeine from Water.

Yang Y, Wan Y, Chen J, Chen H, Li Y, Muñoz-Carpena R, Zheng Y, Huang J, Zhang Y, Gao B.

Water (Basel). 2025 Mar 2;17(6):881. doi: 10.3390/w17060881. Epub 2025 Mar 19.

PMID: 40548291

Sex-specific alterations of Purkinje cell firing in Sgce knockout mice and correlations with myoclonus.

Xing H, Girdhar P, Yokoi F, Li Y.

Dystonia. 2025;4:14415. doi: 10.3389/dyst.2025.14415. Epub 2025 Mar 18.

PMID: 40557327

Understanding the action mechanisms and safety of nanoparticles with functional toxicogenomics.

Yeerkenbieke B, Li Y, Kiessling F, Lammers T, Vulpe C, Pallares RM.

Nanomedicine (Lond). 2025 Jun 26:1-5. doi: 10.1080/17435889.2025.2523733. Online ahead of print.

PMID: 40567138

Big team science reveals promises and limitations of machine learning efforts to model physiological markers of affective experience.

Coles NA, Perz B, Behnke M, Eichstaedt JC, Kim SH, Vu TN, Raman C, Tejada J, Huynh VT, Zhang G, Cui T, Podder S, Chavda R, Pandey S, Upadhyay A, Padilla-Buritica JI, Barrera Causil CJ, Ji L, Dollack F, Kiyokawa K, Liu H, Perusquia-Hernandez M, Uchiyama H, Wei X, Cao H, Yang Z, Iancarelli A, McVeigh K, Wang Y, Berwian IM, Chiu JC, Mirea DM, Nook EC, Vartiainen HI, Whiting C, Cho YW, Chow SM, Fisher ZF, Li Y, Xiong X, Shen Y, Tagliazucchi E, Bugnon LA, Ospina R, Bruno NM, D’Amelio TA, Zamberlan F, Mercado Diaz LR, Pinzon-Arenas JO, Posada-Quintero HF, Bilalpur M, Hinduja S, Marmolejo-Ramos F, Canavan S, Jivnani L, Saganowski S.

R Soc Open Sci. 2025 Jun 25;12(6):241778. doi: 10.1098/rsos.241778. eCollection 2025 Jun.

PMID: 40568544

Molecular Mechanisms of the Biological Control of Pine Wilt Disease Using Microorganisms.

Su X, Luo Y, Hu J, Xia Y, Liu M, Li Y, Wang H.

Microorganisms. 2025 May 26;13(6):1215. doi: 10.3390/microorganisms13061215.

PMID: 40572104

Impact of smoking on occlusion rates following stereotactic radiosurgery for Spetzler Martin grade I-III brain arteriovenous malformations – A propensity score matched analysis of the MISTA consortium.

Sconzo D, Ramirez-Velandia F, Muram S, Enriquez-Marulanda A, Riordan CP, Adeeb N, Musmar B, Salim HA, Kandregula S, Dmywtriw AA, Abdelsalam A, Ataoglu C, Erginoglu U, Kondziolka D, Aslan A, Naamani KE, Sheehan J, Park MS, Zeineddine HA, Ironside N, Kumbhare D, Gummadi S, Essibayi MA, Tos SM, Keles A, Rezai A, Pöppe J, Sen RD, Baskaya MK, Griessenauer CJ, Jabbour P, Tjoumakaris SI, Atallah E, Riina H, Abushehab A, Burkhardt JK, Starke RM, Sekhar LN, Levitt MR, Altschul DJ, Haranhalli N, McAvoy M, Abla A, Stapleton C, Koch M, Srinivasan VM, Chen PR, Blackburn S, Kim LJ, Choudhri O, Pukenas B, Mantziaris G, O’Leary S, Kan P, Li YL, Simonato D, Bulsara K, Fuschi M, Alaraj A, Hanalioglu S, Patel A, Savardekar A, Cuellar H, Lawton M, Morcos J, Guthikonda B, Taussky P, Ogilvy CS; MISTA Consortiumn.

J Clin Neurosci. 2025 Jun 26;139:111411. doi: 10.1016/j.jocn.2025.111411. Online ahead of print.

PMID: 40578008

Behavioral and Demographic Profiles of HIV Transmission and Exposure Networks in Florida: Network Analysis of HIV Contact Tracing Data.

Liu Y, Parisi C, Sun C, Fisk-Hoffman R, Salemi M, Viteri D, Danforth B, Prosperi M, Marini S.

JMIR Public Health Surveill. 2025 Jun 25;11:e65573. doi: 10.2196/65573.

PMID: 40561506

Functional Genomics and Structural Insights into Maize Aldo-Keto Reductase-4 Family: Stress Metabolism and Substrate Specificity in Embryos.

Morais de Sousa S, Oliveira de Giuseppe P, Murakami MT, Guan JC, Saunders JW, Kiyota E, Santos ML, Schmelz EA, Yunes JA, Koch KE.

J Biol Chem. 2025 Jun 20:110404. doi: 10.1016/j.jbc.2025.110404. Online ahead of print.

PMID: 40544997

HLA-B Alleles with Shared Peptide Binding Specificities Define Global Risk of Cotrimoxazole-induced SCAR.

Li Y, Gibson A, Saeed HN, Tahboub MA, Li D, Ostrov DA, Krantz MS, Mallal SA, Alves E, Chopra A, Choo L, Dodiuk-Gad RP, Kaffenberger B, Drucker AM, Goh MS, Ergen E, Micheletti R, Rosenbach M, Martin-Pozo MD, Gangula R, Williams EA, Yu A, O’Connor A, Mahan K, Kwan JT, Metcalfe D, Rashad R, Shanbhag SS, Pedretti S, Choshi P, Chimbetete T, Selim R, James I, Trubiano JA, Lehloenya R, Peter JG, Phillips EJ.

medRxiv [Preprint]. 2025 May 28:2025.05.28.25328237. doi: 10.1101/2025.05.28.25328237.

PMID: 40492078

Subtle changes in Purkinje cell firing in Purkinje cell-specific Dyt1 ΔGAG knock-in mice.

Xing H, Girdhar P, Liu Y, Yokoi F, Vaillancourt DE, Li Y.

Dystonia. 2025;4:14148. doi: 10.3389/dyst.2025.14148. Epub 2025 Jan 29.

PMID: 40557328

Cenozoic geoclimatic changes drove the evolutionary dynamics of floristic endemism on the Qinghai-Tibet Plateau.

Cao GL, Li XQ, Zhang J, Peng HW, Li HL, Erst AS, Jabbour F, Ortiz RDC, Soltis PS, Soltis DE, Wang W.

Proc Natl Acad Sci U S A. 2025 Jul;122(26):e2426017122. doi: 10.1073/pnas.2426017122. Epub 2025 Jun 23.

PMID: 40549922

Identification of Two Genetic Haplotypes Associated with the Roan Coat Color in the American Quarter Horse and Other Equine Breeds.

Everts RE, Caron R, Foster G, McLoone K, Martin K, Brooks SA, Lafayette C.

Animals (Basel). 2025 Jun 9;15(12):1705. doi: 10.3390/ani15121705.

PMID: 40564257

Surgical ICU Admission Criteria: A Scoping Review.

Abbott KL, Hong P, Ruppert MM, Patel PP, Efron PA, Keric N, Kaplan LJ, Martin ND, Loftus TJ.

Crit Care Explor. 2025 Jun 24;7(7):e1278. doi: 10.1097/CCE.0000000000001278. eCollection 2025 Jul 1.

PMID: 40553624

Occurrence and Toxicity Mechanisms of Perfluorononanoic Acid, Perfluorodecanoic Acid, and Perfluoroundecanoic Acid in Fish: A Review.

Ivantsova E, Sultan A, Martyniuk CJ.

Toxics. 2025 May 26;13(6):436. doi: 10.3390/toxics13060436.

PMID: 40559910

Evidence of Coherent Elastic Neutrino-Nucleus Scattering with COHERENT’s Germanium Array.

Adamski S, Ahn M, Barbeau PS, Belov V, Bernardi I, Bock C, Bolozdynya A, Bouabid R, Browning J, Cabrera-Palmer B, Cedarblade-Jones N, Colón Rivera AI, Conley E, da Silva V, Daughhetee J, Detwiler J, Ding K, Durand MR, Efremenko Y, Elliott SR, Erlandson A, Fabris L, Galindo-Uribarri A, Green MP, Hakenmüller J, Heath MR, Hedges S, Jeong H, Johnson BA, Johnson T, Jones H, Khromov A, Kim D, Konovalov A, Kozlova E, Kumpan A, Kyzylova O, Lee Y, Li G, Li L, Link JM, Liu J, Luxnat M, Major A, Mann K, Markoff DM, Mattingly J, Moye J, Mueller PE, Newby J, Ogoi N, O’Reilly J, Parno DS, Pérez-Loureiro D, Pershey D, Prior CG, Queen J, Rapp R, Ray H, Razuvaeva O, Reyna D, Rich GC, Rudik D, Runge J, Salvat DJ, Sander J, Scholberg K, Shakirov A, Simakov G, Snow WM, Sosnovtsev V, Stringer M, Subedi T, Suh B, Sur B, Tayloe R, Tellez-Giron-Flores K, Tsai YT, van Nieuwenhuizen EE, Virtue CJ, Visser G, Walkup K, Ward EM, Wongjirad T, Yang Y, Yoo J, Yu CH, Zaalishvili A; COHERENT Collaboration.

Phys Rev Lett. 2025 Jun 13;134(23):231801. doi: 10.1103/PhysRevLett.134.231801.

PMID: 40577756

Neighborhood Deprivation and Racial Disparities in Heart Failure Outcomes: A Counterfactual Approach.

Huang W, Zhu Y, Kimmel SE, Ahmed MM, Smith SM, Lee YA, Yang C, Bian J, Chen Y, Guo J.

JACC Adv. 2025 Jun;4(6 Pt 2):101808. doi: 10.1016/j.jacadv.2025.101808.

PMID: 40579056

The Vps13-like protein BLTP2 regulates phosphatidylethanolamine levels to maintain plasma membrane fluidity and breast cancer aggressiveness.

Banerjee S, Daetwyler S, Bai X, Michaud M, Jouhet J, Binns D, Madhugiri S, Johnson E, Wang CW, Fiolka R, Toulmay A, Prinz WA.

Nat Cell Biol. 2025 Jun 27. doi: 10.1038/s41556-025-01672-3. Online ahead of print.

PMID: 40579455

International Medical Graduates Representation at International Oncology Conference Meetings: An Analysis of ASCO Annual Meetings.

Roy AM, Bakouny Z, Dizman N, Paul MA, Ozay ZI, Lal BM, Nawfal R, Eid M, Chehade REH, Machaalani M, Butt A, Aggarwal C, Bekaii-Saab T, Chavez-MacGregor M, Lopes G, Marshall AL, Murphy M, Owonikoko T, Xie W, Lee AI, Choueiri TK.

JCO Oncol Pract. 2025 Jun 27:OP2500067. doi: 10.1200/OP-25-00067. Online ahead of print.

PMID: 40577682

Fine-mapping genomic loci refines bipolar disorder risk genes.

Koromina M, Ravi A, Panagiotaropoulou G, Schilder BM, Humphrey J, Braun A, Bidgeli T, Chatzinakos C, Coombes BJ, Kim J, Liu X, Terao C, O’Connell KS, Adams MJ, Adolfsson R, Alda M, Alfredsson L, Andlauer TFM, Andreassen OA, Antoniou A, Baune BT, Bengesser S, Biernacka J, Boehnke M, Bosch R, Cairns MJ, Carr VJ, Casas M, Catts S, Cichon S, Corvin A, Craddock N, Dafnas K, Dalkner N, Dannlowski U, Degenhardt F, Di Florio A, Dikeos D, Fellendorf FT, Ferentinos P, Forstner AJ, Forty L, Frye M, Fullerton JM, Gawlik M, Gizer IR, Gordon-Smith K, Green MJ, Grigoroiu-Serbanescu M, Guzman-Parra J, Hahn T, Henskens F, Hillert J, Jablensky AV, Jones L, Jones I, Jonsson L, Kelsoe JR, Kircher T, Kirov G, Kittel-Schneider S, Kogevinas M, Landén M, Leboyer M, Lenger M, Lissowska J, Lochner C, Loughland C, MacIntyre DJ, Martin NG, Maratou E, Mathews CA, Mayoral F, McElroy SL, McGregor NW, McIntosh A, McQuillin A, Michie P, Mitchell PB, Moutsatsou P, Mowry B, Müller-Myhsok B, Myers RM, Nenadić I, Nievergelt CM, Nöthen MM, Nurnberger J, ‘Donovan MO, ‘Donovan CO, Ophoff RA, Owen MJ, Pantelis C, Pato C, Pato MT, Patrinos GP, Pawlak JM, Perlis RH, Porichi E, Posthuma D, Ramos-Quiroga JA, Reif A, Reininghaus EZ, Ribasés M, Rietschel M, Schall U, Schofield PR, Schulze TG, Scott L, Scott RJ, Serretti A, Smoller JW, Świątkowska B, Soler Artigas M, Stein DJ, Streit F, Toma C, Tooney P, Vawter MP, Vieta E, Vincent JB, Waldman ID, Weickert CS, Weickert T, Witt SH, Hong KS, Ikeda M, Iwata N, Won HH, Edenberg HJ, Ripke S, Raj T, Coleman JRI, Mullins N.

Nat Neurosci. 2025 Jun 25. doi: 10.1038/s41593-025-01998-z. Online ahead of print.

PMID: 40562893

A High-Sensitivity, Bluetooth-Enabled PCB Biosensor for HER2 and CA15-3 Protein Detection in Saliva: A Rapid, Non-Invasive Approach to Breast Cancer Screening.

Wan HH, Chiang CC, Ren F, Tsai CT, Chou YS, Chiu CW, Liao YT, Neal D, Heldermon CD, Rocha MG, Esquivel-Upshaw JF.

Biosensors (Basel). 2025 Jun 15;15(6):386. doi: 10.3390/bios15060386.

PMID: 40558468

Endoderm differentiates into a transient epidermis in the mouse perineum.

Larkins CE, Grunberg DM, Daniels GM, Feldtmann EJ, Cohn MJ.

Dev Dyn. 2025 Jun 25. doi: 10.1002/dvdy.70050. Online ahead of print.

PMID: 40557929

Protein landscape of the brush border membrane of first instar larvae of Frankliniella occidentalis, the western flower thrips.

Maurastoni M, Rotenberg D, Mishra R, Bonning BC, Whitfield AE.

PLoS One. 2025 Jun 24;20(6):e0326260. doi: 10.1371/journal.pone.0326260. eCollection 2025.

PMID: 40554564

Gut commensal bacteria-derived methionine is required for host reproduction by modulating RNA m6A methylation of the insulin receptor.

Zhang Q, Deng Z, Li X, Qiao J, Li Z, Liu P, Handler AM, Lemaitre B, Zheng W, Zhang H.

Cell Rep. 2025 Jun 24;44(7):115911. doi: 10.1016/j.celrep.2025.115911. Online ahead of print.

PMID: 40560723

Simultaneous Observation of RNAs and Their Binding Proteins in Plant Cells.

Ma J, Wang Y, Folimonova SY, Liu B, Wang Y.

Plant Cell Environ. 2025 Jun 22. doi: 10.1111/pce.70034. Online ahead of print.

PMID: 40545697

Preserving the Biologically Coherent Generic Concept of Phytophthora, “Plant Destroyer”.

Brasier CM, Grünwald NJ, Bourret TB, Govers F, Scanu B, Cooke DEL, Bose T, Hawksworth DL, Abad ZG, Albarracin MV, Alsultan W, Altamirano-Junqueira AE, Arifin AR, Arnet MJ, Aumentado HDR, Bakonyi J, Belisle WH, Benigno A, Bienapfl JC, Bilodeau GJ, Blair JE, Botella L, Brandano A, Cacciola SO, Carbone I, Castroagudin VL, Chaendaekattu N, Consford JD, Corcobado T, Covey PA, Daniels HA, Deidda A, Dorrance AE, Dort EN, Drenth A, Drizou F, Evangelisti E, Fajardo SN, Fang Y, Ference CM, Frankel SJ, Goss EM, Guest DI, Hardy GESJ, Harris ARH, Hawku MD, Heungens K, Hong C, Horner IJ, Jung MH, Iyanda OJ, Jamieson BA, Jeffers SN, Judelson HS, Junaid M, Kalogeropoulou E, Kamoun S, Kang S, Kasuga T, Kudláček T, LeBoldus J, Lee CA, Li D, Llanos AK, Lopez-Nicora HD, Machado H, di San Lio GM, Maia C, Mandal K, Manosalva P, Martin FN, Matson MEH, McDougal RL, McDowell JM, Michelmore RW, Milenković I, Moricca S, Mostowfizadeh-Ghalamfarsa R, Nagy ZÁ, Nikolaeva EV, Ortega-López P, Paap T, Parada-Rojas CH, Hand FP, Pérez-Sierra A, Pettersson M, Prasad P, Puig AS, Raco M, Rajput NA, Ristaino JB, Rooney-Latham S, Seidl MF, Shamoun SF, Solla A, Spies CFJ, Sudermann MA, Swiecki TJ, Tian M, Tripathy S, Uematsu S, Van Poucke K, Vichou AE, Walter M, Webber JF, Williams NM, Wingfield MJ, Yadav D, Yang X, Jung T.

Phytopathology. 2025 Jun;115(6):573-586. doi: 10.1094/PHYTO-11-24-0372-LE. Epub 2025 Jun 21.

PMID: 40072242

Multidimensional Modeling to Maximize Adaptations to eXercise: The M³AX Trial Rationale and Study Design.

Graham ZA, Bubak MP, Raymond-Pope CJ, Cutter GR, McAdam JS, Tuggle SC, Siedlik JA, de Sousa LGO, Chappe EJ, Meece K, Kaur A, Ruiz BSR, Bamman SC, Vanselow KM, Perry TW, Acosta-Arreguin JS, Bohmke NJ, Addison GJ, Bowers JM, Wright RL, Fuentes LD, Smith JE, Esser KA, Miller BF, Bodine SC, Bamman MM.

medRxiv [Preprint]. 2025 May 28:2025.05.27.25328425. doi: 10.1101/2025.05.27.25328425.

PMID: 40492097

Cytarabine Pharmacogenomics and Outcomes Among Children and Young Adults With Acute Myeloid Leukemia.

Marrero RJ, Shastri VM, Nicolet D, Mrózek K, Walker CJ, Blum WG, Powell BL, Kolitz JE, Moore JO, Uy GL, Stock W, Carroll AJ, Byrd JC, Aplenc R, Cooper TM, Gamis AS, Wu H, Pounds S, Wang YC, Alonzo TA, Meshinchi S, Eisfeld AK, Kolb EA, Lamba JK.

JAMA Netw Open. 2025 Jun 2;8(6):e2516296. doi: 10.1001/jamanetworkopen.2025.16296.

PMID: 40549387

Perceived health, psychological distress and quality of life in 8415 adults with congenital heart disease from 32 countries.

Moons P, Kovacs AH, Goossens E, Luyckx K, Ladak L, Leye M, Van De Bruaene A, Leong MC, Kaneva A, Manso PH, Araujo JJ, Sasikumar N, Gabriel H, Yadeta D, Wang JK, Enomoto J, Areias ME, Kosmidis D, Coats L, Valente AM, Moon JR, Ladouceur M, Thomet C, Jackson JL, Sandberg C, Callus E, Kim YY, Lykkeberg B, Alday L, Bredy C, Saidi A, Baraona Reyes F, Menahem S, de Hosson M, Hlebowicz J, Christersson C, Zaidi AN, Johansson B, Andresen B, Ambassa JC, Mattsson E, Constantine A, Amedro P, van Melle JP, Kutty S, Ortiz L, Demir F, Khairy P, Windram J, Bouchardy J, Caruana M, Jameson SM, Mahadevan VS, McGrath LB, Mwita JC, Van Bulck L; APPROACH-IS II consortium, on behalf of the International Society for Adults Congenital Heart Disease (ISACHD).

Heart. 2025 Jun 27:heartjnl-2024-325296. doi: 10.1136/heartjnl-2024-325296. Online ahead of print.

PMID: 40579213