UFGI Publication Round-Up: Week of 12/1/2025
Considerations for Spatial Omics, Metabolite Analyses, and Tissue-Harvesting Artifacts.
Hanrieder J, Sun R, Ellis SR, Pahnke J, Savas JN.
J Neurochem. 2025 Dec;169(12):e70315. doi: 10.1111/jnc.70315.
PMID: 41347273
Karuppasamy M, English KG, Conner JR, Rorrer SN, Lopez MA, Crossman DK, Paul JR, Gutierrez-Monreal MA, Gamble KL, Esser KA, Widrick JJ, Kunkel LM, Alexander MS.
Commun Biol. 2025 Dec 2;8(1):1736. doi: 10.1038/s42003-025-09128-y.
PMID: 41331052
López-Gutiérrez B, Hathaway N, Alonso-Palomares L, Nyasembe VO, Kato M, Hamerly T, Parr JB, Juliano JJ, Harbers M, Dinglasan RR.
iScience. 2025 Oct 31;28(12):113919. doi: 10.1016/j.isci.2025.113919. eCollection 2025 Dec 19.
PMID: 41321633
Urinary extracellular vesicles for high-precision bladder cancer subtyping and prognosis.
Greenberg ZF, Hutchinson TE, Kahn J, Graim KS, O’Malley P, He M.
medRxiv [Preprint]. 2025 Oct 17:2025.10.14.25338041. doi: 10.1101/2025.10.14.25338041.
PMID: 41282769
Leveraging Medicaid Claims to Map Complex Chronic Conditions for Emergency Preparedness.
Hall JM, McCraney MR, Vincent CA, Lurk PA, Erichsen K, Chakrabarti C, Mkuu RS, Cogle CR.
J Public Health Manag Pract. 2025 Dec 3. doi: 10.1097/PHH.0000000000002283. Online ahead of print.
PMID: 41337630
Ratcliffe J, Lerner CE, Balu K, Chatterjee S, Lee KM, Caglayan M.
NAR Mol Med. 2025 Oct 28;2(4):ugaf038. doi: 10.1093/narmme/ugaf038. eCollection 2025 Oct.
PMID: 41346861
Connell ML, Gonzalez GF, Meyer DN, Hahn A, Cavaneau E, Kintzele EK, Baker BB, Baker TR.
J Hazard Mater. 2025 Nov 25;501:140620. doi: 10.1016/j.jhazmat.2025.140620. Online ahead of print.
PMID: 41337969
Gautam P, Zhao J, Levi C, Raman S, Owens BD, Strauss JF 3rd, Tossas KY.
Cancer Epidemiol Biomarkers Prev. 2025 Dec 1;34(12):2169-2177. doi: 10.1158/1055-9965.EPI-25-0627.
PMID: 41065349
Sepsis Induces Age- and Sex-Specific Chromatin Remodeling in Myeloid-Derived Suppressor Cells.
Charles AM, Rodhouse CE, Darden DB, Gauthier ML, Zhou M, Hernandez-Rios M, Wang D, Casadesus G, Bible L, Mohr AM, Xiao F, Cai G, Brant JO, Wallet SM, Mathews CE, Moldawer LL, Chakrabarty P, Bacher RL, Efron PA, Maile R, Kladde MP.
bioRxiv [Preprint]. 2025 Oct 16:2025.05.26.656229. doi: 10.1101/2025.05.26.656229.
PMID: 41279791
Zhou Z, Liu J, Wu WE, Fang R, Liu S, Wei Q, Yan R, Guo Y, Tao Q, Wang Y, Islam MT, Xing L.
Nat Comput Sci. 2025 Dec 4. doi: 10.1038/s43588-025-00911-9. Online ahead of print.
PMID: 41345469
A respiratory signature of disease progression in the Pompe rat.
Mickle AR, Rana S, Benevides ES, Byrne BJ, Fuller DD, Dale EA.
J Neurophysiol. 2025 Dec 5. doi: 10.1152/jn.00305.2025. Online ahead of print.
PMID: 41348648
tRNA Modification Landscapes in Streptococci: Shared Losses and Clade-Specific Adaptations.
Tsui HT, Chan CK, Yuan Y, Elias R, Sun J, Marchand V, Jaroch M, Sun G, Manzoor I, Kutchuashvili A, Motorin Y, Leszczynska G, Seaton K, Rice KC, Swairjo MA, Winkler ME, Dedon PC, de Crécy-Lagard V.
bioRxiv [Preprint]. 2025 Nov 8:2025.10.13.681863. doi: 10.1101/2025.10.13.681863.
PMID: 41280037
Shabanian M, Pouladi N, Wilson L, Prosperi M, Lussier YA.
JMIR Bioinform Biotechnol. 2025 Oct 8;6:e80735. doi: 10.2196/80735.
PMID: 41342203
Molina Stornelli I, Bliznyuk N, Roig JC, Neu J, Kisilewicz K, Rajderkar D, Sura L, Patel S, Chong D, Vadakal S, Edwards T, Weiss MD.
J Matern Fetal Neonatal Med. 2025 Dec;38(1):2592375. doi: 10.1080/14767058.2025.2592375. Epub 2025 Dec 3.
PMID: 41338591