UFGI Publication Round- up: Week of 4/8/24

Qian H, Moreira G, Vanegas D, Tang Y, Pola C, Gomes C, McLamore E, Bliznyuk N.

Sci Rep. 2024 Apr 5;14(1):7980. doi: 10.1038/s41598-024-57932-z.

PMID: 38575717

Infant microbes and metabolites point to childhood neurodevelopmental disorders.

Ahrens AP, Hyötyläinen T, Petrone JR, Igelström K, George CD, Garrett TJ, Orešič M, Triplett EW, Ludvigsson J.

Cell. 2024 Mar 27:S0092-8674(24)00238-1. doi: 10.1016/j.cell.2024.02.035. Online ahead of print.

PMID: 38574728

Life goes on: Spatial heterogeneity promotes biodiversity in an urbanized coastal marine ecosystem.

McIlroy SE, Guibert I, Archana A, Chung WYH, Duffy JE, Gotama R, Hui J, Knowlton N, Leray M, Meyer C, Panagiotou G, Paulay G, Russell B, Thompson PD, Baker DM.

Glob Chang Biol. 2024 Apr;30(4):e17248. doi: 10.1111/gcb.17248.

PMID: 38581126

Neuron-level explainable AI for Alzheimer’s Disease assessment from fundus images.

Yousefzadeh N, Tran C, Ramirez-Zamora A, Chen J, Fang R, Thai MT.

Sci Rep. 2024 Apr 2;14(1):7710. doi: 10.1038/s41598-024-58121-8.

PMID: 38565579

Effects of dietary iron deficiency or overload on bone: Dietary details matter.

Baschant U, Fuqua BK, Ledesma-Colunga M, Vulpe CD, McLachlan S, Hofbauer LC, Lusis AJ, Rauner M.

Bone. 2024 Apr 2:117092. doi: 10.1016/j.bone.2024.117092. Online ahead of print.

PMID: 38575048

Complexity of avian evolution revealed by family-level genomes.

Stiller J, Feng S, Chowdhury AA, Rivas-González I, Duchêne DA, Fang Q, Deng Y, Kozlov A, Stamatakis A, Claramunt S, Nguyen JMT, Ho SYW, Faircloth BC, Haag J, Houde P, Cracraft J, Balaban M, Mai U, Chen G, Gao R, Zhou C, Xie Y, Huang Z, Cao Z, Yan Z, Ogilvie HA, Nakhleh L, Lindow B, Morel B, Fjeldså J, Hosner PA, da Fonseca RR, Petersen B, Tobias JA, Székely T, Kennedy JD, Reeve AH, Liker A, Stervander M, Antunes A, Tietze DT, Bertelsen M, Lei F, Rahbek C, Graves GR, Schierup MH, Warnow T, Braun EL, Gilbert MTP, Jarvis ED, Mirarab S, Zhang G.

Nature. 2024 Apr 1. doi: 10.1038/s41586-024-07323-1. Online ahead of print.

PMID: 38560995

A region of suppressed recombination misleads neoavian phylogenomics.

Mirarab S, Rivas-González I, Feng S, Stiller J, Fang Q, Mai U, Hickey G, Chen G, Brajuka N, Fedrigo O, Formenti G, Wolf JBW, Howe K, Antunes A, Schierup MH, Paten B, Jarvis ED, Zhang G, Braun EL.

Proc Natl Acad Sci U S A. 2024 Apr 9;121(15):e2319506121. doi: 10.1073/pnas.2319506121. Epub 2024 Apr 1.

PMID: 38557186

A phenome-wide association and Mendelian randomisation study of alcohol use variants in a diverse cohort comprising over 3 million individuals.

Jennings MV, Martínez-Magaña JJ, Courchesne-Krak NS, Cupertino RB, Vilar-Ribó L, Bianchi SB, Hatoum AS, Atkinson EG, Giusti-Rodriguez P, Montalvo-Ortiz JL, Gelernter J, Artigas MS; 23andMe, Inc. Research Team; Elson SL, Edenberg HJ, Fontanillas P, Palmer AA, Sanchez-Roige S.

EBioMedicine. 2024 Apr 2:105086. doi: 10.1016/j.ebiom.2024.105086. Online ahead of print.

PMID: 38580523

Multiplexed gene editing in citrus by using a multi-intron containing Cas9 gene.

Sarkar P, Santiago Vazquez J, Zhou M, Levy A, Mou Z, Orbović V.

Transgenic Res. 2024 Apr 2. doi: 10.1007/s11248-024-00380-2. Online ahead of print.

PMID: 38564120

Evaluating differences in milk production, reproductive performance, and survival associated with vaginal discharge characteristics and fever in postpartum dairy cows.

Figueiredo CC, Casaro S, Cunha F, Merenda VR, de Oliveira EB, Pinedo P, Santos JEP, Chebel RC, Schuenemann GM, Bicalho RC, Gilbert RO, Zas SR, Seabury CM, Rosa G, Thatcher WW, Bisinotto RS, Galvão KN.

J Dairy Sci. 2024 Apr 3:S0022-0302(24)00637-4. doi: 10.3168/jds.2023-23905. Online ahead of print.

PMID: 38580147