UFGI Publication Round-up: Week of 4/22/24

UFGI Publication Round-up: Week of 4/22/24

MPRAVarDB: an online database and web server for exploring regulatory effects of genetic variants.

Nizomov J, Jin W, Xia Y, Liu Y, Li Z, Chen L.

bioRxiv [Preprint]. 2024 Apr 3:2024.04.02.587790. doi: 10.1101/2024.04.02.587790.

PMID: 38617248

Autophagy gene expression in skeletal muscle of older individuals is associated with physical performance, muscle volume and mitochondrial function in the study of muscle, mobility and aging (SOMMA).

Coen PM, Huo Z, Tranah GJ, Barnes HN, Zhang X, Wolff CA, Wu K, Cawthon PM, Hepple RT, Toledo FGS, Evans DS, Santiago-Fernández O, Cuervo AM, Kritchevsky SB, Newman AB, Cummings SR, Esser KA.

Aging Cell. 2024 Apr 16:e14118. doi: 10.1111/acel.14118. Online ahead of print.

PMID: 38627910

Single-cell transcriptional landscapes of bovine peri-implantation development.

Scatolin GN, Ming H, Wang Y, Iyyappan R, Gutierrez-Castillo E, Zhu L, Sagheer M, Song C, Bondioli K, Jiang Z.

iScience. 2024 Mar 27;27(4):109605. doi: 10.1016/j.isci.2024.109605. eCollection 2024 Apr 19.

PMID: 38633001

Geographic And Taxonomic Occurrence R-based Scrubbing (gatoRs): An R package and workflow for processing biodiversity data.

Patten NN, Gaynor ML, Soltis DE, Soltis PS.

Appl Plant Sci. 2024 Mar 21;12(2):e11575. doi: 10.1002/aps3.11575. eCollection 2024 Mar-Apr.

PMID: 38638614

Measuring local genetic variation in permethrin-resistant head lice (Phthiraptera: Pediculidae) from Buenos Aires, Argentina.

Toloza AC, Ascunce MS, Reed DL.

J Med Entomol. 2024 Apr 18:tjae048. doi: 10.1093/jme/tjae048. Online ahead of print.

PMID: 38635291

Assessment of Patient-Derived Xenograft Growth and Antitumor Activity: The NCI PDXNet Consensus Recommendations.

Meric-Bernstam F, Lloyd MW, Koc S, Evrard YA, McShane LM, Lewis MT, Evans KW, Li D, Rubinstein LV, Welm AL, Dean DA, Srivastava A, Grover JW, Ha MJ, Chen H, Huang X, Varadarajan K, Wang J, Roth JA, Welm BE, Govindan R, Ding L, Kaochar S, Mitsiades N, Carvajal-Carmona LG, Herlyn M, Davies MA, Shapiro GI, Fields RC, Trevino JG, Harrell JC, Doroshow JH, Chuang JH, Moscow JA.

Mol Cancer Ther. 2024 Apr 20. doi: 10.1158/1535-7163.MCT-23-0471. Online ahead of print.

PMID: 38641411

Genome comparisons reveal accessory genes crucial for the evolution of apple Glomerella leaf spot pathogenicity in Colletotrichum fungi.

Liang X, Yu W, Meng Y, Shang S, Tian H, Zhang Z, Rollins JA, Zhang R, Sun G.

Mol Plant Pathol. 2024 Apr;25(4):e13454. doi: 10.1111/mpp.13454.

PMID: 38619507

Association between trajectories of adherence to endocrine therapy and risk of treated breast cancer recurrence among US nonmetastatic breast cancer survivors.

Chang CY, Jones BL, Hincapie-Castillo JM, Park H, Heldermon CD, Diaby V, Wilson DL, Lo-Ciganic WH.

Br J Cancer. 2024 Apr 18. doi: 10.1038/s41416-024-02680-0. Online ahead of print.

PMID: 38637603

Lipidomics and plasma hormone analysis differentiate reproductive and pregnancy statuses in Florida manatees (Trichechus manatus latirostris).

Brammer-Robbins E, Nouri MZ, Griffin EK, Aristizabal-Henao JJ, Denslow ND, Bowden JA, Larkin IV, Martyniuk CJ.

Comp Biochem Physiol Part D Genomics Proteomics. 2024 Apr 3;50:101231. doi: 10.1016/j.cbd.2024.101231. Online ahead of print.

PMID: 38643744

Photochemical behaviour and toxicity evolution of phenylbenzoate liquid crystal monomers in water.

Li C, Li S, Zhang X, Jiang X, Yang Y, Qu J, Martyniuk CJ.

J Hazard Mater. 2024 Apr 16;471:134320. doi: 10.1016/j.jhazmat.2024.134320. Online ahead of print.

PMID: 38640663

Early Metabolic Endpoints Identify Persistent Treatment Efficacy in Recent-Onset Type 1 Diabetes Immunotherapy Trials.

Jacobsen LM, Cuthbertson D, Bundy BN, Atkinson MA, Moore W, Haller MJ, Russell WE, Gitelman SE, Herold KC, Redondo MJ, Sims EK, Wherrett DK, Moran A, Pugliese A, Gottlieb PA, Sosenko JM, Ismail HM; Type 1 Diabetes TrialNet Study Group.

Diabetes Care. 2024 Apr 15:dc240171. doi: 10.2337/dc24-0171. Online ahead of print.

PMID: 38621411

Similar metabolic pathways are affected in both Congenital Myasthenic Syndrome-22 and Prader-Willi Syndrome.

Bhalla K, Rosier K, Monnens Y, Meulemans S, Vervoort E, Thorrez L, Agostinis P, Meier DT, Rochtus A, Resnick JL, Creemers JWM.

Biochim Biophys Acta Mol Basis Dis. 2024 Apr 14:167175. doi: 10.1016/j.bbadis.2024.167175. Online ahead of print.

PMID: 38626828

The Effect of Low-Dose Glucocorticoids Over Two Years on Weight and Blood Pressure in Rheumatoid Arthritis.

Theophilopoulos A, Bubb MR.

Ann Intern Med. 2024 Apr;177(4):546. doi: 10.7326/L24-0005.

PMID: 38621266

Coat protein of a whitefly-vectored plant virus as a delivery system to target whitefly.

Jiménez J, Kemmerer M, King GF, Polston JE, Bonning BC.

Microb Biotechnol. 2024 Apr;17(4):e14468. doi: 10.1111/1751-7915.14468.

PMID: 38635158

Aurora kinase A inhibition plus Tumor Treating Fields suppress glioma cell proliferation in a cilium-independent manner.

Tian J, Mallinger JC, Shi P, Ling D, Deleyrolle LP, Lin M, Khoshbouei H, Sarkisian MR.

Transl Oncol. 2024 Apr 18;45:101956. doi: 10.1016/j.tranon.2024.101956. Online ahead of print.

PMID: 38640786

Cilia at the Crossroads of Tumor Treating Fields and Chemotherapy.

Deleyrolle LP, Sarkisian MR.

Dev Neurosci. 2023;45(3):139-146. doi: 10.1159/000529193. Epub 2023 Jan 17.

PMID: 38630257