UFGI Publication Round-up: Week of 4/15/24

Investigating flock-associated mimicry: examining the evidence for, and drivers of, plumage mimicry in the greater and lesser necklaced laughingthrush.

Gosai KR, Zhou L, Liu Y, Braun EL, Kimball RT, Robinson SK, Jiang A, Goodale E.

R Soc Open Sci. 2024 Apr 10;11(4):230976. doi: 10.1098/rsos.230976. eCollection 2024 Apr.

PMID: 38601036

DeepDynaForecast: Phylogenetic-informed graph deep learning for epidemic transmission dynamic prediction.

Sun C, Fang R, Salemi M, Prosperi M, Rife Magalis B.

PLoS Comput Biol. 2024 Apr 10;20(4):e1011351. doi: 10.1371/journal.pcbi.1011351. Online ahead of print.

PMID: 38598563

The Burden of Cancer and Pre-cancerous Conditions Among Transgender Individuals in a Large Healthcare Network.

Yang S, Li Y, Wheldon CW, Prosperi M, George TJ, Shenkman EA, Wang F, Bian J, Guo Y.

medRxiv [Preprint]. 2024 Mar 26:2024.03.24.24304777. doi: 10.1101/2024.03.24.24304777.

PMID: 38585849

OCTOPUS: Disk-based, Multiplatform, Mobile-friendly Metagenomics Classifier.

Marini S, Barquero A, Wadhwani AA, Bian J, Ruiz J, Boucher C, Prosperi M.

bioRxiv [Preprint]. 2024 Mar 15:2024.03.15.585215. doi: 10.1101/2024.03.15.585215.

PMID: 38559026

Effectiveness of Clopidogrel vs Alternative P2Y₁₂ Inhibitors Based on the ABCD-GENE Score.

Thomas CD, Franchi F, Rossi JS, Keeley EC, Anderson RD, Beitelshees AL, Duarte JD, Ortega-Paz L, Gong Y, Kerensky RA, Kulick N, McDonough CW, Nguyen AB, Wang Y, Winget M, Yang WE, Johnson JA, Winterstein AG, Stouffer GA, Angiolillo DJ, Lee CR, Cavallari LH.

J Am Coll Cardiol. 2024 Apr 16;83(15):1370-1381. doi: 10.1016/j.jacc.2024.02.015.

PMID: 38599713

Estimating preferences and willingness to pay for pharmacogenetic testing in populations who are medically underserved: a discrete choice experiment.

Gawronski BE, Salloum RG, Duarte JD.

Front Pharmacol. 2024 Mar 26;15:1384667. doi: 10.3389/fphar.2024.1384667. eCollection 2024.

PMID: 38595920

Machine learning to identify endometrial biomarkers predictive of pregnancy success following artificial insemination in dairy cows.

Hoorn QA, Rabaglino MB, Amaral TF, Maia TS, Yu F, Cole JB, Hansen PJ.

Biol Reprod. 2024 Apr 9:ioae052. doi: 10.1093/biolre/ioae052. Online ahead of print.

PMID: 38590174

Syndromic surveillance of population-level COVID-19 burden with cough monitoring in a hospital emergency waiting room.

Al Hossain F, Tonmoy MTH, Nuvvula S, Chapman BP, Gupta RK, Lover AA, Dinglasan RR, Carreiro S, Rahman T.

Front Public Health. 2024 Mar 28;12:1279392. doi: 10.3389/fpubh.2024.1279392. eCollection 2024.

PMID: 38605877

An Interpretable Population Graph Network to Identify Rapid Progression of Alzheimer’s Disease Using UK Biobank.

Meng W, Inampudi R, Zhang X, Xu J, Huang Y, Xie M, Bian J, Yin R.

medRxiv [Preprint]. 2024 Mar 28:2024.03.27.24304966. doi: 10.1101/2024.03.27.24304966.

PMID: 38585886

Waterborne exposure to the antineoplastic 5-fluorouracil alters lipid composition in larval zebrafish (Danio rerio).

Ivantsova E, Henry E, Konig I, English C, Souders CL 2nd, Point AD, Simmons D, Martyniuk CJ.

Sci Total Environ. 2024 Apr 9:172377. doi: 10.1016/j.scitotenv.2024.172377. Online ahead of print.

PMID: 38604366

Genotype-by-environment interactions and local adaptation shape selection in the US National Chip Processing Trial.

Agha HI, Endelman JB, Chitwood-Brown J, Clough M, Coombs J, De Jong WS, Douches DS, Higgins CR, Holm DG, Novy R, Resende MFR, Sathuvalli V, Thompson AL, Yencho GC, Zotarelli L, Shannon LM.

Theor Appl Genet. 2024 Apr 10;137(5):99. doi: 10.1007/s00122-024-04610-3.

PMID: 38598016

Rumen-Protected Choline Improves Metabolism and Lactation Performance in Dairy Cows.

Lima FS, Sá Filho MF, Greco LF, Santos JEP.

Animals (Basel). 2024 Mar 27;14(7):1016. doi: 10.3390/ani14071016.

PMID: 38612255

NSD2 drives t(4;14) myeloma cell dependence on adenylate kinase 2 by diverting one-carbon metabolism to the epigenome.

Sobh A, Encinas E, Patel AM, Surapaneni G, Bonilla E, Kaestner CL, Poullard J PA-S, Clerio M, Vasan K, Freeman T, Lv D, Dupéré-Richer D, Riva A, Barwick BG, Zhou D, Boise LH, Mitsiades CS, Kim B, Bennett RL, Chandel NS, Licht JD.

Blood. 2024 Apr 10:blood.2023022859. doi: 10.1182/blood.2023022859. Online ahead of print.

PMID: 38598835

Biochemical Fractionation of Human α-Synuclein in a Drosophila Model of Synucleinopathies.

Imomnazarov K, Lopez-Scarim J, Bagheri I, Joers V, Tansey MG, Martín-Peña A.

Int J Mol Sci. 2024 Mar 25;25(7):3643. doi: 10.3390/ijms25073643.

PMID: 38612454

Modulation of cannabinoid receptor 2 alters neuroinflammation and reduces formation of alpha-synuclein aggregates in a rat model of nigral synucleinopathy.

Joers V, Murray BC, McLaughlin C, Oliver D, Staley H, Coronado J, Achat-Mendes C, Golshani S, Kelly SD, Goodson M, Lee D, Manfredsson FP, Moore BM 2nd, Tansey MG.

bioRxiv [Preprint]. 2024 Mar 23:2023.08.25.554814. doi: 10.1101/2023.08.25.554814.

PMID: 38562842

RAB32 Ser71Arg in autosomal dominant Parkinson’s disease: linkage, association, and functional analyses.

Gustavsson EK, Follett J, Trinh J, Barodia SK, Real R, Liu Z, Grant-Peters M, Fox JD, Appel-Cresswell S, Stoessl AJ, Rajput A, Rajput AH, Auer R, Tilney R, Sturm M, Haack TB, Lesage S, Tesson C, Brice A, Vilariño-Güell C, Ryten M, Goldberg MS, West AB, Hu MT, Morris HR, Sharma M, Gan-Or Z, Samanci B, Lis P, Periñan MT, Amouri R, Ben Sassi S, Hentati F; Global Parkinson’s Genetics Program (GP2); Tonelli F, Alessi DR, Farrer MJ.

Lancet Neurol. 2024 Apr 10:S1474-4422(24)00121-2. doi: 10.1016/S1474-4422(24)00121-2. Online ahead of print.

PMID: 38614108

Clinical utility of plasma Aβ42/40 ratio by LC-MS/MS in Alzheimer’s disease assessment.

Weber DM, Taylor SW, Lagier RJ, Kim JC, Goldman SM, Clarke NJ, Vaillancourt DE, Duara R, McFarland KN, Wang WE, Golde TE, Racke MK.

Front Neurol. 2024 Mar 25;15:1364658. doi: 10.3389/fneur.2024.1364658. eCollection 2024.

PMID: 38595851