UFGI Publication Round-Up: Week of 11/4/24

Hernandez-Rios M, Rincon JC, Efron PA, Larson SD.

Pediatr Res. 2024 Nov 1. doi: 10.1038/s41390-024-03673-8. Online ahead of print.

PMID: 39482498

Surviving septic patients endotyped with a functional assay demonstrate active immune responses.

Price AD, Becker ER, Barrios EL, Mazer MB, McGonagill PW, Bergmann CB, Goodman MD, Gould RW, Rao M, Polcz VE, Kucaba TA, Walton AH, Miles S, Xu J, Liang M, Loftus TJ, Efron PA, Remy KE, Brakenridge SC, Badovinac VP, Griffith TS, Moldawer LL, Hotchkiss RS, Caldwell CC.

Front Immunol. 2024 Oct 14;15:1418613. doi: 10.3389/fimmu.2024.1418613. eCollection 2024.

PMID: 39469706

Spatial pattern and differential expression analysis with spatial transcriptomic data.

Qin F, Luo X, Lu Q, Cai B, Xiao F, Cai G.

Nucleic Acids Res. 2024 Oct 29:gkae962. doi: 10.1093/nar/gkae962. Online ahead of print.

PMID: 39470725

Phylodynamic Insights into Global Emergence and Diversification of the Tomato Pathogen Xanthomonas hortorum pv. gardneri.

Jibrin MO, Sharma A, Mavian CN, Timilsina S, Kaur A, Iruegas-Bocardo F, Potnis N, Minsavage GV, Coutinho TA, Creswell TC, Egel DS, Francis DM, Kebede M, Miller SA, Montelongo MJ, Nikolaeva E, Pianzzola MJ, Pruvost O, Quezado-Duval AM, Ruhl GE, Shutt VM, Maynard E, Maeso DC, Siri MI, Trueman CL, Salemi M, Vallad GE, Roberts PD, Jones JB, Goss EM.

Mol Plant Microbe Interact. 2024 Oct;37(10):712-720. doi: 10.1094/MPMI-04-24-0035-R. Epub 2024 Sep 25.

PMID: 38949619

Machine learning-optimized non-invasive brain stimulation and treatment response classification for major depression.

Albizu A, Indahlastari A, Suen P, Huang Z, Waner JL, Stolte SE, Fang R, Brunoni AR, Woods AJ.

Bioelectron Med. 2024 Oct 30;10(1):25. doi: 10.1186/s42234-024-00157-2.

PMID: 39473014

Alzheimer’s disease-associated protective variant Plcg2-P522R modulates peripheral macrophage function in a sex-dimorphic manner.

Staley HA, Jernigan JE, Bolen ML, Titus AM, Neighbarger N, Cole C, Menees KB, Wallings RL, Tansey MG.

J Neuroinflammation. 2024 Nov 1;21(1):280. doi: 10.1186/s12974-024-03271-9.

PMID: 39487477

Thinking outside the brain: Gut microbiome influence on innate immunity within neurodegenerative disease.

Merchak AR, Bolen ML, Tansey MG, Menees KB.

Neurotherapeutics. 2024 Oct 31:e00476. doi: 10.1016/j.neurot.2024.e00476. Online ahead of print.

PMID: 39482179

Revealing host genome-microbiome networks underlying feed efficiency in dairy cows.

Martinez-Boggio G, Monteiro HF, Lima FS, Figueiredo CC, Bisinotto RS, Santos JEP, Mion B, Schenkel FS, Ribeiro ES, Weigel KA, Rosa GJM, Peñagaricano F.

Sci Rep. 2024 Oct 30;14(1):26060. doi: 10.1038/s41598-024-77782-z.

PMID: 39472728

Early Detection of Wildlife Disease Pathogens Using CRISPR-Cas System Methods.

Pérez AA, Vazquez-Meves G, Hunter ME.

CRISPR J. 2024 Oct 31. doi: 10.1089/crispr.2024.0030. Online ahead of print.

PMID: 39479796

Spiny mice are primed but fail to regenerate volumetric skeletal muscle loss injuries.

Davenport ML, Fong A, Albury KN, Henley-Beasley CS, Barton ER, Maden M, Swanson MS.

Skelet Muscle. 2024 Oct 29;14(1):26. doi: 10.1186/s13395-024-00358-y.

PMID: 39468576

The Pharmacogenomics Global Research Network Implementation Working Group: global collaboration to advance pharmacogenetic implementation.

Cavallari LH, Hicks JK, Patel JN, Elchynski AL, Smith DM, Bargal SA, Fleck A, Aquilante CL, Killam SR, Lemke L, Ochi T, Ramsey LB, Haidar CE, Ho T, El Rouby N, Monte AA, Allen JD, Beitelshees AL, Bishop JR, Bousman C, Campbell R, Cicali EJ, Cook KJ, Duong B, Tsermpini EE, Girdwood ST, Gregornik DB, Grimsrud KN, Lamb N, Lee JC, Lopez RO, Mazhindu TA, Morris SA, Nagy M, Nguyen J, Pasternak AL, Petry N, van Schaik RHN, Schultz A, Skaar TC, Al Alshaykh H, Stevenson JM, Stone RM, Tran NK, Tuteja S, Woodahl EL, Yuan LC, Lee CR.

Pharmacogenet Genomics. 2024 Oct 4. doi: 10.1097/FPC.0000000000000547. Online ahead of print.

PMID: 39485373

Information mismatch in PHH3-assisted mitosis annotation leads to interpretation shifts in H&E slide analysis.

Ganz J, Marzahl C, Ammeling J, Rosbach E, Richter B, Puget C, Denk D, Demeter EA, Tăbăran FA, Wasinger G, Lipnik K, Tecilla M, Valentine MJ, Dark MJ, Abele N, Bolfa P, Erber R, Klopfleisch R, Merz S, Donovan TA, Jabari S, Bertram CA, Breininger K, Aubreville M.

Sci Rep. 2024 Nov 1;14(1):26273. doi: 10.1038/s41598-024-77244-6.

PMID: 39487193

Sedation for awake tracheal intubation: A systematic review and network meta-analysis.

El-Boghdadly K, Desai N, Jones JB, Elghazali S, Ahmad I, Sneyd JR.

Anaesthesia. 2024 Oct 28. doi: 10.1111/anae.16452. Online ahead of print.

PMID: 39468765

Effect of apremilast on hand and whole-body MRI assessments of inflammation in patients with psoriatic arthritis (MOSAIC): a phase 4, multicentre, single-arm, open-label study.

Østergaard M, Boesen M, Maksymowych WP, Lambert RG, Bubb MR, Kubassova O, Valenzuela G, Reddy J, Colgan S, Klyachkin Y, Deignan C, Zhou Z, Amouzadeh H, Mease PJ.

Lancet Rheumatol. 2024 Oct 30:S2665-9913(24)00232-7. doi: 10.1016/S2665-9913(24)00232-7. Online ahead of print.

PMID: 39488216

Neurocognitive correlates of cerebral mitochondrial function and energy metabolism using phosphorus magnetic resonance spectroscopy in older adults.

Lopez FV, O’Shea A, Huo Z, DeKosky ST, Trouard TP, Alexander GE, Woods AJ, Bowers D.

Geroscience. 2024 Oct 31. doi: 10.1007/s11357-024-01403-w. Online ahead of print.

PMID: 39477865

Is Lung Cancer Screening Knowledge Associated with Patient-Centered Outcomes? A Multi-institutional Cohort Study.

Schweiger L, Golden SE, Sullivan DR, Ilea I, Rice SPM, Melzer AC, Datta S, Davis JM, Slatore CG.

MDM Policy Pract. 2024 Oct 17;9(2):23814683241286884. doi: 10.1177/23814683241286884. eCollection 2024 Jul-Dec.

PMID: 39483616

Cipaglucosidase alfa plus miglustat: linking mechanism of action to clinical outcomes in late-onset Pompe disease.

Byrne BJ, Parenti G, Schoser B, van der Ploeg AT, Do H, Fox B, Goldman M, Johnson FK, Kang J, Mehta N, Mondick J, Sheikh MO, Sitaraman Das S, Tuske S, Brudvig J, Weimer JM, Mozaffar T.

Front Neurol. 2024 Oct 18;15:1451512. doi: 10.3389/fneur.2024.1451512. eCollection 2024.

PMID: 39494167