UFGI Publication Round-up: Week of 11/1/21

Longitudinal Plasma Lipidome and Risk of Type 2 Diabetes in a Large Sample of American Indians With Normal Fasting Glucose: The Strong Heart Family Study.

Miao G, Zhang Y, Huo Z, Zeng W, Zhu J, Umans JG, Wohlgemuth G, Pedrosa D, DeFelice B, Cole SA, Fretts AM, Lee ET, Howard BV, Fiehn O, Zhao J.

Diabetes Care. 2021 Oct 26:dc210451. doi: 10.2337/dc21-0451. Online ahead of print.

PMID: 34702783

Site-specific modifications to AAV8 capsid yields enhanced brain transduction in the neonatal MPS IIIB mouse.

Gilkes JA, Judkins BL, Herrera BN, Mandel RJ, Boye SL, Boye SE, Srivastava A, Heldermon CD.

Gene Ther. 2021 Aug;28(7-8):447-455. doi: 10.1038/s41434-020-00206-w. Epub 2020 Nov 26.

PMID: 33244179

The SUMO ligase MMS21 profoundly influences maize development through its impact on genome activity and stability.

Zhang J, Augustine RC, Suzuki M, Feng J, Char SN, Yang B, McCarty DR, Vierstra RD.

PLoS Genet. 2021 Oct 25;17(10):e1009830. doi: 10.1371/journal.pgen.1009830. Online ahead of print.

PMID: 34695110

CD177 modulates the function and homeostasis of tumor-infiltrating regulatory T cells.

Kim MC, Borcherding N, Ahmed KK, Voigt AP, Vishwakarma A, Kolb R, Kluz PN, Pandey G, De U, Drashansky T, Helm EY, Zhang X, Gibson-Corley KN, Klesney-Tait J, Zhu Y, Lu J, Lu J, Huang X, Xiang H, Cheng J, Wang D, Wang Z, Tang J, Hu J, Wang Z, Liu H, Li M, Zhuang H, Avram D, Zhou D, Bacher R, Zheng SG, Wu X, Zakharia Y, Zhang W.

Nat Commun. 2021 Oct 1;12(1):5764. doi: 10.1038/s41467-021-26091-4.

PMID: 34599187

Multidimensional Genome-wide Screening in Yeast Provides Mechanistic Insights into Europium Toxicity.

Pallares RM, An DD, Hébert S, Faulkner D, Loguinov A, Proctor M, Villalobos JA, Bjornstad KA, Rosen CJ, Vulpe C, Abergel RJ.

Metallomics. 2021 Oct 25:mfab061. doi: 10.1093/mtomcs/mfab061. Online ahead of print.

PMID: 34694395

 

A comprehensive review of 1,2,4-triazole fungicide toxicity in zebrafish (Danio rerio): A mitochondrial and metabolic perspective.

Huang T, Jiang H, Zhao Y, He J, Cheng H, Martyniuk CJ.

Sci Total Environ. 2021 Oct 23:151177. doi: 10.1016/j.scitotenv.2021.151177. Online ahead of print.

PMID: 34699814

A Six-Day, Lifestyle-Based Immersion Program Mitigates Cardiovascular Risk Factors and Induces Shifts in Gut Microbiota, Specifically Lachnospiraceae, Ruminococcaceae, Faecalibacterium prausnitzii: A Pilot Study.

Ahrens AP, Culpepper T, Saldivar B, Anton S, Stoll S, Handberg EM, Xu K, Pepine C, Triplett EW, Aggarwal M.

Nutrients. 2021 Sep 29;13(10):3459. doi: 10.3390/nu13103459.

PMID: 34684459

Analyzing a phenological anomaly in Yucca of the southwestern United States.

Brenskelle L, Barve V, Majure LC, Guralnick RP, Li D.

Sci Rep. 2021 Oct 21;11(1):20819. doi: 10.1038/s41598-021-00265-y.

PMID: 34675272

β1-receptor polymorphisms and postoperative junctional ectopic tachycardia in children after cardiac surgery.

Dumeny L, Chantra M, Langaee T, Duong BQ, Zambrano DH, Han F, Lopez-Colon D, Humma JF, Dacosta J, Lovato T, Mei C, Duarte JD, Johnson JA, Peek GJ, Jacobs JP, Bleiweis MS, Cavallari LH.

Clin Transl Sci. 2021 Oct 29. doi: 10.1111/cts.13178. Online ahead of print.

PMID: 34713976

ADAR editing in viruses: an evolutionary force to reckon with.

Piontkivska H, Wales-McGrath B, Miyamoto M, Wayne ML.

Genome Biol Evol. 2021 Oct 25:evab240. doi: 10.1093/gbe/evab240. Online ahead of print.

PMID: 34694399

Plastid phylogenomic insights into relationships of all flowering plant families.

Li HT, Luo Y, Gan L, Ma PF, Gao LM, Yang JB, Cai J, Gitzendanner MA, Fritsch PW, Zhang T, Jin JJ, Zeng CX, Wang H, Yu WB, Zhang R, van der Bank M, Olmstead RG, Hollingsworth PM, Chase MW, Soltis DE, Soltis PS, Yi TS, Li DZ.

BMC Biol. 2021 Oct 29;19(1):232. doi: 10.1186/s12915-021-01166-2.

PMID: 34711223

Scratching the surface of RGD-directed AAV capsid engineering.

Zolotukhin S, Trivedi PD, Corti M, Byrne BJ.

Mol Ther. 2021 Oct 25:S1525-0016(21)00527-X. doi: 10.1016/j.ymthe.2021.10.020. Online ahead of print.

PMID: 34699781

Gene delivery to the hypoglossal motor system: preclinical studies and translational potential.

Doyle BM, Singer ML, Fleury-Curado T, Rana S, Benevides ES, Byrne BJ, Polotsky VY, Fuller DD.

Gene Ther. 2021 Aug;28(7-8):402-412. doi: 10.1038/s41434-021-00225-1. Epub 2021 Feb 11.

PMID: 33574581

Structure of Lipopolysaccharide from Liberibacter crescens Is Low Molecular Weight and Offers Insight into Candidatus Liberibacter Biology.

Black IM, Heiss C, Jain M, Muszyński A, Carlson RW, Gabriel DW, Azadi P.

Int J Mol Sci. 2021 Oct 18;22(20):11240. doi: 10.3390/ijms222011240.

PMID: 34681907

Phylogeny of gracillariid leaf-mining moths: evolution of larval behaviour inferred from phylogenomic and Sanger data.

Li X, St Laurent R, Earl C, Doorenweerd C, van Nieukerken EJ, Davis DR, Johns CA, Kawakita A, Kobayashi S, Zwick A, Lopez-Vaamonde C, Ohshima I, Kawahara AY.

Cladistics. 2021 Oct 28. doi: 10.1111/cla.12490. Online ahead of print.

PMID: 34710244

Climate change effects on animal ecology: butterflies and moths as a case study.

Hill GM, Kawahara AY, Daniels JC, Bateman CC, Scheffers BR.

Biol Rev Camb Philos Soc. 2021 Oct;96(5):2113-2126. doi: 10.1111/brv.12746. Epub 2021 May 30.

PMID: 34056827

Known and New Emerging Viruses Infecting Blueberry.

Saad N, Olmstead JW, Jones JB, Varsani A, Harmon PF.

Plants (Basel). 2021 Oct 14;10(10):2172. doi: 10.3390/plants10102172.

PMID: 34685980

CRISPR/Cas9-Mediated Multi-Allelic Gene Targeting in Sugarcane Confers Herbicide Tolerance.

Oz MT, Altpeter A, Karan R, Merotto A, Altpeter F.

Front Genome Ed. 2021 Jul 8;3:673566. doi: 10.3389/fgeed.2021.673566. eCollection 2021.

PMID: 34713261

Multiallelic, Targeted Mutagenesis of Magnesium Chelatase With CRISPR/Cas9 Provides a Rapidly Scorable Phenotype in Highly Polyploid Sugarcane.

Eid A, Mohan C, Sanchez S, Wang D, Altpeter F.

Front Genome Ed. 2021 Apr 29;3:654996. doi: 10.3389/fgeed.2021.654996. eCollection 2021.

PMID: 34713257

AAV3-miRNA vectors for growth suppression of human hepatocellular carcinoma cells in vitro and human liver tumors in a murine xenograft model in vivo.

Yin L, Keeler GD, Zhang Y, Hoffman BE, Ling C, Qing K, Srivastava A.

Gene Ther. 2021 Aug;28(7-8):422-434. doi: 10.1038/s41434-020-0140-1. Epub 2020 Mar 9.

PMID: 32152434

Global Methylome Scores Correlate with Histological Subtypes of Colorectal Carcinoma and Show Different Associations with Common Clinical and Molecular Features.

Turpín-Sevilla MDC, Pérez-Sanz F, García-Solano J, Sebastián-León P, Trujillo-Santos J, Carbonell P, Estrada E, Tuomisto A, Herruzo I, Fennell LJ, Mäkinen MJ, Rodríguez-Braun E, Whitehall VLJ, Conesa A, Conesa-Zamora P.

Cancers (Basel). 2021 Oct 14;13(20):5165. doi: 10.3390/cancers13205165.

PMID: 34680315

Vitamins are Indeed Vital Amines: A Discussion of 3 Deficiencies With Neurologic Manifestations.

Tarhan B, Rahman S, Joseph N, Hyder D, Zingariello C, Borum PR, Sladky J, Winesett SP.

Child Neurol Open. 2021 Oct 23;8:2329048X211046440. doi: 10.1177/2329048X211046440. eCollection 2021 Jan-Dec.

PMID: 34708143

Versatile mRNA-Nanoparticle Platform for Treatment of Glioblastoma.

Grippin A, Wummer B, Wildes T, Dyson K, Mendez-Gomez H, Dobson J, Mitchell D, Sayour E.

Int J Radiat Oncol Biol Phys. 2021 Nov 1;111(3S):e251-e252. doi: 10.1016/j.ijrobp.2021.07.838.

PMID: 34701016

Advancing the global public health agenda for NAFLD: a consensus statement.

Lazarus JV, Mark HE, Anstee QM, Arab JP, Batterham RL, Castera L, Cortez-Pinto H, Crespo J, Cusi K, Dirac MA, Francque S, George J, Hagström H, Huang TT, Ismail MH, Kautz A, Sarin SK, Loomba R, Miller V, Newsome PN, Ninburg M, Ocama P, Ratziu V, Rinella M, Romero D, Romero-Gómez M, Schattenberg JM, Tsochatzis EA, Valenti L, Wong VW, Yilmaz Y, Younossi ZM, Zelber-Sagi S; NAFLD Consensus Consortium.

Nat Rev Gastroenterol Hepatol. 2021 Oct 27. doi: 10.1038/s41575-021-00523-4. Online ahead of print.

PMID: 34707258

Microtubule-based transport is essential to distribute RNA and nascent protein in skeletal muscle.

Denes LT, Kelley CP, Wang ET.

Nat Commun. 2021 Oct 27;12(1):6079. doi: 10.1038/s41467-021-26383-9.

PMID: 34707124

Ribonuclease recruitment using a small molecule reduced c9ALS/FTD r(G₄C₂) repeat expansion in vitro and in vivo ALS models.

Bush JA, Aikawa H, Fuerst R, Li Y, Ursu A, Meyer SM, Benhamou RI, Chen JL, Khan T, Wagner-Griffin S, Van Meter MJ, Tong Y, Olafson H, McKee KK, Childs-Disney JL, Gendron TF, Zhang Y, Coyne AN, Wang ET, Yildirim I, Wang KW, Petrucelli L, Rothstein JD, Disney MD.

Sci Transl Med. 2021 Oct 27;13(617):eabd5991. doi: 10.1126/scitranslmed.abd5991. Epub 2021 Oct 27.

PMID: 34705518

Visuomotor brain network activation and functional connectivity among individuals with autism spectrum disorder.

Lepping RJ, McKinney WS, Magnon GC, Keedy SK, Wang Z, Coombes SA, Vaillancourt DE, Sweeney JA, Mosconi MW.

Hum Brain Mapp. 2021 Oct 30. doi: 10.1002/hbm.25692. Online ahead of print.

PMID: 34716740