UFGI Publication Round-up: Week of 1/9/23

UFGI Publication Round-up: Week of 1/9/23

Uncertainty-aware deep learning in healthcare: A scoping review.

Loftus TJ, Shickel B, Ruppert MM, Balch JA, Ozrazgat-Baslanti T, Tighe PJ, Efron PA, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A.

PLOS Digit Health. 2022;1(8):e0000085. doi: 10.1371/journal.pdig.0000085. Epub 2022 Aug 10.

PMID: 36590140

Editorial: Cannabinoids in neuroinflammation, neurodegeneration and pain: Focus on non-neuronal cells.

Vecchiarelli HA, Joers V, Tansey MG, Starowicz K.

Front Neurosci. 2022 Dec 20;16:1114775. doi: 10.3389/fnins.2022.1114775. eCollection 2022.

PMID: 36605549

Labeling and analyzing lipid droplets in mouse muscle stem cells.

Chen J, Yue F, Kuang S.

STAR Protoc. 2022 Dec 16;3(4):101849. doi: 10.1016/j.xpro.2022.101849. Epub 2022 Nov 19.

PMID: 36595920

Assessment of systemic AAV-microdystrophin gene therapy in the GRMD model of Duchenne muscular dystrophy.

Birch SM, Lawlor MW, Conlon TJ, Guo LJ, Crudele JM, Hawkins EC, Nghiem PP, Ahn M, Meng H, Beatka MJ, Fickau BA, Prieto JC, Styner MA, Struharik MJ, Shanks C, Brown KJ, Golebiowski D, Bettis AK, Balog-Alvarez CJ, Clement N, Coleman KE, Corti M, Pan X, Hauschka SD, Gonzalez JP, Morris CA, Schneider JS, Duan D, Chamberlain JS, Byrne BJ, Kornegay JN.

Sci Transl Med. 2023 Jan 4;15(677):eabo1815. doi: 10.1126/scitranslmed.abo1815. Epub 2023 Jan 4.

PMID: 36599002

Unknown Metabolite Identification Using Machine Learning Collision Cross-Section Prediction and Tandem Mass Spectrometry.

Asef CK, Rainey MA, Garcia BM, Gouveia GJ, Shaver AO, Leach FE 3rd, Morse AM, Edison AS, McIntyre LM, Fernández FM.

Anal Chem. 2023 Jan 3. doi: 10.1021/acs.analchem.2c03749. Online ahead of print.

PMID: 36595469

How to Implement a Pharmacogenetics Service at your Institution.

Cicali EJ, Lemke L, Al Alshaykh H, Nguyen K, Cavallari LH, Wiisanen K.

J Am Coll Clin Pharm. 2022 Nov;5(11):1161-1175. doi: 10.1002/jac5.1699. Epub 2022 Aug 27.

PMID: 36589694

Pharmacogenetics of P2Y12 Receptor Inhibitors.

Thomas CD, Williams AK, Lee CR, Cavallari LH.

Pharmacotherapy. 2023 Jan 1. doi: 10.1002/phar.2758. Online ahead of print.

PMID: 36588476

CYP2D6 pharmacogenetics and phenoconversion in personalized medicine.

Nahid NA, Johnson JA.

Expert Opin Drug Metab Toxicol. 2023 Jan 3:1-17. doi: 10.1080/17425255.2022.2160317. Online ahead of print.

PMID: 36597259

Analysis of Enzyme Activity and Cellular Function for the N80S and S480F Asparagine Synthetase Variants Expressed in a Child with Asparagine Synthetase Deficiency.

Staklinski SJ, Snanoudj S, Guerrot AM, Vanhulle C, Lecoquierre F, Bekri S, Kilberg MS.

Int J Mol Sci. 2022 Dec 29;24(1):559. doi: 10.3390/ijms24010559.

PMID: 36613999

Maize resistance to witchweed through changes in strigolactone biosynthesis.

Li C, Dong L, Durairaj J, Guan JC, Yoshimura M, Quinodoz P, Horber R, Gaus K, Li J, Setotaw YB, Qi J, De Groote H, Wang Y, Thiombiano B, Floková K, Walmsley A, Charnikhova TV, Chojnacka A, Correia de Lemos S, Ding Y, Skibbe D, Hermann K, Screpanti C, De Mesmaeker A, Schmelz EA, Menkir A, Medema M, Van Dijk ADJ, Wu J, Koch KE, Bouwmeester HJ.

Science. 2023 Jan 6;379(6627):94-99. doi: 10.1126/science.abq4775. Epub 2023 Jan 5.

PMID: 36603079

Tomato fruit quality is more strongly affected by scion type and planting season than by rootstock type.

Gong T, Brecht JK, Hutton SF, Koch KE, Zhao X.

Front Plant Sci. 2022 Dec 15;13:948556. doi: 10.3389/fpls.2022.948556. eCollection 2022.

PMID: 36589104

A systematic assessment of how rootstock growth characteristics impact grafted tomato plant biomass, resource partitioning, yield, and fruit mineral composition.

Gong T, Brecht JK, Koch KE, Hutton SF, Zhao X.

Front Plant Sci. 2022 Dec 15;13:948656. doi: 10.3389/fpls.2022.948656. eCollection 2022.

PMID: 36589098

Extracellular proteins OSM-7 and OSM-8 are required for stress response gene regulation at all post-embryonic stages.

Rodriguez Mendoza V, Chandler L, Liu Z, Buddendorff L, Al-Rajhi A, Choi T, Gibb G, Harvey J, Mihalik A, Moravec S, Pilcher W, Raju V, Choe KP.

MicroPubl Biol. 2022 Dec 13;2022:10.17912/micropub.biology.000688. doi: 10.17912/micropub.biology.000688. eCollection 2022.

PMID: 36606078

Liver fibrosis may lower PSA levels: A further reason to be wary in prostate cancer screening in men with HIV?

Mazzitelli M, Foca’ E, Prosperi M, Cauda R, Farinacci D, Iannone V, Castelli F, Carriero C, Pan A, Saracino A, Torti C, Quiros-Roldan E.

HIV Med. 2023 Jan 2. doi: 10.1111/hiv.13456. Online ahead of print.

PMID: 36593693

Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5′-monophosphate as the biological substrate.

Hung SH, Elliott GI, Ramkumar TR, Burtnyak L, McGrenaghan CJ, Alkuzweny S, Quaiyum S, Iwata-Reuyl D, Pan X, Green BD, Kelly VP, de Crécy-Lagard V, Swairjo MA.

Nucleic Acids Res. 2023 Jan 5:gkac1231. doi: 10.1093/nar/gkac1231. Online ahead of print.

PMID: 36610787