UFGI Publication Round-up: Week of 1/17/22

Liu L, Lyu X, Pan Z, Wang Q, Mu W, Benny U, Rollins JA, Pan H.

Phytopathology. 2022 Jan 12. doi: 10.1094/PHYTO-09-21-0378-R. Online ahead of print.

PMID: 35021860

Pharmacogenetic predictors of nevirapine pharmacokinetics in Ghanaian children living with HIV with or without TB coinfection.

Langaee T, Al-Shaer MH, Gong Y, Lima E, Antwi S, Enimil A, Dompreh A, Yang H, Alghamdi WA, Wiesner L, Peloquin CA, Kwara A.

Infect Genet Evol. 2021 Aug;92:104856. doi: 10.1016/j.meegid.2021.104856. Epub 2021 Apr 8.

PMID: 33839311

Clinical Pharmacogenetics Implementation Consortium Guideline for CYP2C19 Genotype and Clopidogrel Therapy: 2022 Update.

Lee CR, Luzum JA, Sangkuhl K, Gammal RS, Sabatine MS, Stein CM, Kisor DF, Limdi NA, Lee YM, Scott SA, Hulot JS, Roden DM, Gaedigk A, Caudle KE, Klein TE, Johnson JA, Shuldiner AR.

Clin Pharmacol Ther. 2022 Jan 16. doi: 10.1002/cpt.2526. Online ahead of print.

PMID: 35034351

Proteomics: a new era in pediatric acute myeloid leukemia research.

Lamba JK, Pounds S.

Haematologica. 2022 Jan 13. doi: 10.3324/haematol.2021.280305. Online ahead of print.

PMID: 35021610

Myotonic dystrophy type 1 embryonic stem cells show decreased myogenic potential, increased CpG methylation at the DMPK locus and RNA mis-splicing.

Franck S, Couvreu De Deckersberg E, Bubenik JL, Markouli C, Barbé L, Allemeersch J, Hilven P, Duqué G, Swanson MS, Gheldof A, Spits C, Sermon KD.

Biol Open. 2022 Jan 15;11(1):bio058978. doi: 10.1242/bio.058978. Epub 2022 Jan 12.

PMID: 35019138

Microbiome Resilience despite a Profound Loss of Minority Microbiota following Clindamycin Challenge in Humanized Gnotobiotic Mice.

Liu L, Kirst ME, Zhao L, Li E, Wang GP.

Microbiol Spectr. 2022 Jan 12:e0196021. doi: 10.1128/spectrum.01960-21. Online ahead of print.

PMID: 35019780

Delivery of DNA into Human Cells by Functionalized Lignin Nanoparticles.

Riley MK 2nd, Vermerris W.

Materials (Basel). 2022 Jan 1;15(1):303. doi: 10.3390/ma15010303.

PMID: 35009448

Complete vertebrate mitogenomes reveal widespread repeats and gene duplications.

Formenti G, Rhie A, Balacco J, Haase B, Mountcastle J, Fedrigo O, Brown S, Capodiferro MR, Al-Ajli FO, Ambrosini R, Houde P, Koren S, Oliver K, Smith M, Skelton J, Betteridge E, Dolucan J, Corton C, Bista I, Torrance J, Tracey A, Wood J, Uliano-Silva M, Howe K, McCarthy S, Winkler S, Kwak W, Korlach J, Fungtammasan A, Fordham D, Costa V, Mayes S, Chiara M, Horner DS, Myers E, Durbin R, Achilli A, Braun EL, Phillippy AM, Jarvis ED; Vertebrate Genomes Project Consortium.

Genome Biol. 2021 Apr 29;22(1):120. doi: 10.1186/s13059-021-02336-9.

PMID: 33910595

Molecular and behavioral assessment in larval zebrafish (Danio rerio) following exposure to environmentally relevant levels of the antineoplastic cyclophosphamide.

Ivantsova E, Huang M, Wengrovitz AS, Souders CL 2nd, Martyniuk CJ.

Environ Toxicol Pharmacol. 2022 Jan 13:103809. doi: 10.1016/j.etap.2022.103809. Online ahead of print.

PMID: 35033682

The metabolome as a biomarker of aging in Drosophila melanogaster.

Zhao X, Golic FT, Harrison BR, Manoj M, Hoffman EV, Simon N, Johnson R, MacCoss MJ, McIntyre LM, Promislow DEL.

Aging Cell. 2022 Jan 12:e13548. doi: 10.1111/acel.13548. Online ahead of print.

PMID: 35019203

Post translational modifications of Trifolitoxin: a blue fluorescent peptide antibiotic.

Lethbridge BJ, Asenstorfer RE, Bailey LS, Breil BT, Johnson JV, Jones GP, Rumjanek V, Sims JJ, Tate ME, Triplett EW.

J Antibiot (Tokyo). 2022 Jan 12. doi: 10.1038/s41429-021-00497-0. Online ahead of print.

PMID: 35022574

Scalable algorithms for semiparametric accelerated failure time models in high dimensions.

Suder PM, Molstad AJ.

Stat Med. 2022 Jan 11. doi: 10.1002/sim.9264. Online ahead of print.

PMID: 35014701

Mediterranean Diet Adherence in People With Parkinson’s Disease Reduces Constipation Symptoms and Changes Fecal Microbiota After a 5-Week Single-Arm Pilot Study.

Rusch C, Beke M, Tucciarone L, Nieves C Jr, Ukhanova M, Tagliamonte MS, Mai V, Suh JH, Wang Y, Chiu S, Patel B, Ramirez-Zamora A, Langkamp-Henken B.

Front Neurol. 2021 Dec 23;12:794640. doi: 10.3389/fneur.2021.794640. eCollection 2021.

PMID: 35002935

Niche dynamics of Memecylon in Sri Lanka: Distribution patterns, climate change effects, and conservation priorities.

Amarasinghe P, Barve N, Kathriarachchi H, Loiselle B, Cellinese N.

Ecol Evol. 2021 Dec 3;11(24):18196-18215. doi: 10.1002/ece3.8415. eCollection 2021 Dec.

PMID: 35003667