University of Florida word mark
Visit the Genetics & Genomics Graduate Program Homepage

UFGI Publication round-up week 8/26

Growth dynamics and survival of Liberibacter crescens BT-1, an important model organism for the citrus Huanglongbing pathogen ‘Candidatus Liberibacter asiaticus’.

Sena-Vélez M, Holland SD, Aggarwal M, Cogan NG, Jain M, Gabriel DW, Jones KM.

Appl Environ Microbiol. 2019 Aug 16. pii: AEM.01656-19. doi: 10.1128/AEM.01656-19.

PMID: 31420343

Genomic merit for reproductive traits. II: Physiological responses of Holstein heifers.

Veronese A, Marques O, Peñagaricano F, Bisinotto RS, Pohler KG, Bilby TR, Chebel RC.

J Dairy Sci. 2019 Jul;102(7):6639-6648. doi: 10.3168/jds.2018-15245. Epub 2019 Apr 25.

PMID: 31030930

Genomic merit for reproductive traits. I: Estrous characteristics and fertility in Holstein heifers.

Veronese A, Marques O, Moreira R, Belli AL, Bisinotto RS, Bilby TR, Peñagaricano F, Chebel RC.

J Dairy Sci. 2019 Jul;102(7):6624-6638. doi: 10.3168/jds.2018-15205. Epub 2019 Apr 25.

PMID: 31030916

Northern Blot with IR Fluorescent Probes: Strategies for Probe Preparation.

Fields C, Sheng P, Miller B, Wei T, Xie M.

Bio Protoc. 2019 Apr 20;9(8). pii: e3219. doi: 10.21769/BioProtoc.3219.

PMID: 31428663

Understanding the Efficiency of Splenic Hemangiosarcoma Diagnosis Using Monte Carlo Simulations.

Herman EJ, Stern AW, Fox RJ, Dark MJ.

Vet Pathol. 2019 Aug 18:300985819868732. doi: 10.1177/0300985819868732.

PMID: 31422751

Exploring Lung Cancer Screening Discussions on Twitter.

Zhao Y, Huo J, Prosperi M, Guo Y, Li Y, Bian J.

Stud Health Technol Inform. 2019 Aug 21;264:2011-2012. doi: 10.3233/SHTI190760.

PMID: 31438454

Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter.

Modave F, Zhao Y, Krieger J, He Z, Guo Y, Huo J, Prosperi M, Bian J.

Stud Health Technol Inform. 2019 Aug 21;264:1293-1297. doi: 10.3233/SHTI190435.

PMID: 31438134

Statistical thinking, machine learning.

Bian J, Buchan I, Guo Y, Prosperi M.

J Clin Epidemiol. 2019 Aug 16. pii: S0895-4356(19)30495-0. doi: 10.1016/j.jclinepi.2019.08.003. [Epub ahead of print] No abstract available.

PMID: 31425737

Certification for gene-edited forests.

Strauss SH, Boerjan W, Chiang V, Costanza A, Coleman H, Davis JM, Lu MZ, Mansfield SD, Merkle S, Myburg A, Nilsson O, Pilate G, Powell W, Seguin A, Valenzuela S.

Science. 2019 Aug 23;365(6455):767-768. doi: 10.1126/science.aay6165. No abstract available.

PMID: 31439790

Genome-Wide Meta-Analysis of Blood Pressure Response to β1-Blockers: Results From ICAPS (International Consortium of Antihypertensive Pharmacogenomics Studies).

Singh S, Warren HR, Hiltunen TP, McDonough CW, El Rouby N, Salvi E, Wang Z, Garofalidou T, Fyhrquist F, Kontula KK, Glorioso V, Zaninello R, Glorioso N, Pepine CJ, Munroe PB, Turner ST, Chapman AB, Boerwinkle E, Johnson JA, Gong Y, Cooper-DeHoff RM.

J Am Heart Assoc. 2019 Aug 20;8(16):e013115. doi: 10.1161/JAHA.119.013115. Epub 2019 Aug 19.

PMID: 31423876

Recombinase Polymerase Amplification Assay for Field Detection of Tomato Bacterial Spot Pathogens.

Strayer-Scherer A, Jones JB, Paret ML.

Phytopathology. 2019 Apr;109(4):690-700. doi: 10.1094/PHYTO-03-18-0101-R. Epub 2019 Feb 22. PMID: 30211633

Replication timing networks reveal a link between transcription regulatory circuits and replication timing control.

Rivera-Mulia JC, Kim S, Gabr H, Chakraborty A, Ay F, Kahveci T, Gilbert DM.

Genome Res. 2019 Aug 21. doi: 10.1101/gr.247049.118. [Epub ahead of print]

PMID: 31434679

Identification of co-evolving temporal networks.

Elhesha R, Sarkar A, Boucher C, Kahveci T.

BMC Genomics. 2019 Jun 13;20(Suppl 6):434. doi: 10.1186/s12864-019-5719-9.

PMID: 31189471

Overexpression of a S-Adenosylmethionine Decarboxylase from Sugar Beet M14 Increased Araidopsis Salt Tolerance.

Ji M, Wang K, Wang L, Chen S, Li H, Ma C, Wang Y.

Int J Mol Sci. 2019 Apr 23;20(8). pii: E1990. doi: 10.3390/ijms20081990.

PMID: 31018555

A Survey of Declining Palms (Arecaceae) With 16SrIV-D Phytoplasma to Evaluate the Distribution and Host Range in Florida.

Bahder BW, Soto N, Helmick EE, Dey KK, Komondy L, Humphries AR, Mou DF, Bailey R, Ascunce MS, Goss EM.

Plant Dis. 2019 Aug 20:PDIS03190633RE. doi: 10.1094/PDIS-03-19-0633-RE.

PMID: 31432773

Genome Sequence Data of Six Isolates of Phytophthora capsici from Mexico.

Reyes-Tena A, Huguet-Tapia JC, Lamour KH, Goss EM, Rodríguez-Alvarado G, Vázquez-Marrufo G, Santillán-Mendoza R, Fernández-Pavía SP.

Mol Plant Microbe Interact. 2019 Aug 19:MPMI01190014A. doi: 10.1094/MPMI-01-19-0014-A.

PMID: 31425006

The role of BTBD9 in striatum and restless legs syndrome.

Lyu S, Xing H, DeAndrade MP, Liu Y, Perez PD, Yokoi F, Febo M, Walters AS, Li Y.

eNeuro. 2019 Aug 23. pii: ENEURO.0277-19.2019. doi: 10.1523/ENEURO.0277-19.2019.

PMID: 31444227

Genome-Wide Association Studies Identified Resistance Loci to Orange Rust and Yellow Leaf Virus Diseases in Sugarcane (Saccharum spp.).

Yang X, Sood S, Luo Z, Todd J, Wang J.

Phytopathology. 2019 Apr;109(4):623-631. doi: 10.1094/PHYTO-08-18-0282-R. Epub 2019 Mar 6.

PMID: 30277119

Mitigating RNA Toxicity in Myotonic Dystrophy using Small Molecules.

Reddy K, Jenquin JR, Cleary JD, Berglund JA.

Int J Mol Sci. 2019 Aug 17;20(16). pii: E4017. doi: 10.3390/ijms20164017. Review.

PMID: 31426500

Expressing Arsenite Antiporter PvACR3;1 in Rice (Oryza sativa L.) Decreases Inorganic Arsenic Content in Rice Grains.

Chen Y, Hua CY, Chen JX, Rathinasabapathi B, Cao Y, Ma LQ.

Environ Sci Technol. 2019 Aug 19. doi: 10.1021/acs.est.9b02418. [Epub ahead of print]

PMID: 31369709

CRISPR propels a smart hydrogel.

Han D, Li J, Tan W.

Science. 2019 Aug 23;365(6455):754-755. doi: 10.1126/science.aay4198. No abstract available.

PMID: 31439783

Asparagine synthetase is highly expressed at baseline in the pancreas through heightened PERK signaling.

Mukherjee A, Ahmed N, Rose F, Ahmad AN, Javed TA, Wen L, Bottino R, Xiao X, Kilberg MS, Husain SZ.

Cell Mol Gastroenterol Hepatol. 2019 Aug 14. pii: S2352-345X(19)30109-2. doi: 10.1016/j.jcmgh.2019.08.003.

PMID: 31421261