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UFGI Publication round-up week 2/17/20

Cost-effectiveness of CYP2C19-guided antiplatelet therapy in patients with acute coronary syndrome and percutaneous coronary intervention informed by real-world data.

Limdi NA, Cavallari LH, Lee CR, Hillegass WB, Holmes AM, Skaar TC, Pisu M, Dillon C, Beitelshees AL, Empey PE, Duarte JD, Diaby V, Gong Y, Johnson JA, Graves J, Garbett S, Zhou Z, Peterson JF; Implementing GeNomics In pracTicE (IGNITE) Network Pharmacogenetic Working Group (IGNITE-PGx).

Pharmacogenomics J. 2020 Feb 11. doi: 10.1038/s41397-020-0162-5. [Epub ahead of print]

PMID: 32042096

MYCN amplification and ATRX mutations are incompatible in neuroblastoma.

Zeineldin M, Federico S, Chen X, Fan Y, Xu B, Stewart E, Zhou X, Jeon J, Griffiths L, Nguyen R, Norrie J, Easton J, Mulder H, Yergeau D, Liu Y, Wu J, Van Ryn C, Naranjo A, Hogarty MD, Kamiński MM, Valentine M, Pruett-Miller SM, Pappo A, Zhang J, Clay MR, Bahrami A, Vogel P, Lee S, Shelat A, Sarthy JF, Meers MP, George RE, Mardis ER, Wilson RK, Henikoff S, Downing JR, Dyer MA.

Nat Commun. 2020 Feb 14;11(1):913. doi: 10.1038/s41467-020-14682-6.

PMID: 32060267

Enhanced in Vivo Blood-Brain Barrier Penetration by Circular Tau-Transferrin Receptor Bifunctional Aptamer for Tauopathy Therapy.

Li X, Yang Y, Zhao H, Zhu T, Yang Z, Xu H, Fu Y, Lin F, Pan X, Li L, Cui C, Hong M, Yang L, Wang KK, Tan W.

J Am Chem Soc. 2020 Feb 11. doi: 10.1021/jacs.9b11490. [Epub ahead of print]

PMID: 31991082

NCBP2modulates neurodevelopmental defects of the 3q29 deletion in Drosophila and Xenopus laevis models.

Singh MD, Jensen M, Lasser M, Huber E, Yusuff T, Pizzo L, Lifschutz B, Desai I, Kubina A, Yennawar S, Kim S, Iyer J, Rincon-Limas DE, Lowery LA, Girirajan S.

PLoS Genet. 2020 Feb 13;16(2):e1008590. doi: 10.1371/journal.pgen.1008590. [Epub ahead of print]

PMID: 32053595

Hepatocyte nuclear factor 4α negatively regulates connective tissue growth factor during liver regeneration.

Zhou J, Sun X, Yang L, Wang L, Ran G, Wang J, Cao Q, Wu L, Bryant A, Ling C, Pi L.

FASEB J. 2020 Feb 14. doi: 10.1096/fj.201902382R. [Epub ahead of print]

PMID: 32057145

The uncharacterized gene EVE contributes to vessel element dimensions in Populus.

Ribeiro CL, Conde D, Balmant KM, Dervinis C, Johnson MG, McGrath AP, Szewczyk P, Unda F, Finegan CA, Schmidt HW, Miles B, Drost DR, Novaes E, Gonzalez-Benecke CA, Peter GF, Burleigh JG, Martin TA, Mansfield SD, Chang G, Wickett NJ, Kirst M.

Proc Natl Acad Sci U S A. 2020 Feb 10. pii: 201912434. doi: 10.1073/pnas.1912434117. [Epub ahead of print]

PMID: 32041869

Environmental Triggers of lrgA Expression in Streptococcus mutans.

Ishkov IP, Ahn SJ, Rice KC, Hagen SJ.

Front Microbiol. 2020 Jan 28;11:18. doi: 10.3389/fmicb.2020.00018. eCollection 2020.

PMID: 32047487


Immune protection is dependent on the gut microbiome in a lethal mouse gammaherpesviral infection.

Yaron JR, Ambadapadi S, Zhang L, Chavan RN, Tibbetts SA, Keinan S, Varsani A, Maldonado J, Kraberger S, Tafoya AM, Bullard WL, Kilbourne J, Stern-Harbutte A, Krajmalnik-Brown R, Munk BH, Koppang EO, Lim ES, Lucas AR.

Sci Rep. 2020 Feb 11;10(1):2371. doi: 10.1038/s41598-020-59269-9.

PMID: 32047224

Whole genome sequencing of carbapenem-resistant <i>Klebsiella pneumoniae</i>: evolutionary analysis for outbreak investigation.

Fontana C, Angeletti S, Mirandola W, Cella E, Alessia L, Zehender G, Favaro M, Leoni D, Rose DD, Gherardi G, Florio L, Salemi M, Andreoni M, Sarmati L, Ciccozzi M.

Future Microbiol. 2020 Feb 14. doi: 10.2217/fmb-2019-0074.

PMID: 32056447

The global spread of 2019-nCoV: a molecular evolutionary analysis.

Benvenuto D, Giovanetti M, Salemi M, Prosperi M, De Flora C, Junior Alcantara LC, Angeletti S, Ciccozzi M.

Pathog Glob Health. 2020 Feb 12:1-4. doi: 10.1080/20477724.2020.1725339. [Epub ahead of print]

PMID: 32048560

Comparative analysis of the viral interferon regulatory factors of KSHV for their requisite for virus production and inhibition of the type I interferon pathway.

Golas G, Jang SJ, Naik NG, Alonso JD, Papp B, Toth Z.

Virology. 2020 Feb;541:160-173. doi: 10.1016/j.virol.2019.12.011. Epub 2019 Dec 30.

PMID: 32056714

Archaeosine modification of archaeal tRNA – a role in structural stabilization.

Turner B, Burkhart BW, Weidenbach K, Ross R, Limbach PA, Schmitz RA, de Crécy-Lagard V, Stedman KM, Santangelo TJ, Iwata-Reuyl D.

J Bacteriol. 2020 Feb 10. pii: JB.00748-19. doi: 10.1128/JB.00748-19. [Epub ahead of print]

PMID: 32041795

Axially-Chiral Cannabinols: A New Platform for Cannabinoid-Inspired Drug Discovery.

Grenning AJ, Navaratne PV, Wilkerson JL, Ranasinghe KD, Semenova E, Felix JS, Ghiviriga I, Roitberg A, McMahon LR.

ChemMedChem. 2020 Feb 15. doi: 10.1002/cmdc.202000025. [Epub ahead of print]

PMID: 32061146

Detection of Phenylpropanoids in Citrus Leaves Produced in Response to Xanthomonas citrisubsp. citri.

Ference CM, Manthey JA, Narciso JA, Jones JB, Baldwin EA.

Phytopathology. 2020 Feb;110(2):287-296. doi: 10.1094/PHYTO-06-19-0219-R. Epub 2020 Jan 5.

PMID: 31713458


Natural selection and repeated patterns of molecular evolution following allopatric divergence.

Dong Y, Chen S, Cheng S, Zhou W, Ma Q, Chen Z, Fu CX, Liu X, Zhao YP, Soltis PS, Wong GK, Soltis DE, Xiang QJ.

Elife. 2019 Aug 2;8. pii: e45199. doi: 10.7554/eLife.45199.

PMID: 31373555

Manipulation of sensory characteristics and volatile compounds in strawberry fruit through the use of isolated wavelengths of light.

Campbell SM, Sims CA, Bartoshuk LM, Colquhoun TA, Schwieterman ML, Folta KM.

J Food Sci. 2020 Feb 11. doi: 10.1111/1750-3841.15044. [Epub ahead of print]

PMID: 32043600


The global spread of 2019-nCoV: a molecular evolutionary analysis.

Benvenuto D, Giovanetti M, Salemi M, Prosperi M, De Flora C, Junior Alcantara LC, Angeletti S, Ciccozzi M.

Pathog Glob Health. 2020 Feb 12:1-4. doi: 10.1080/20477724.2020.1725339. [Epub ahead of print]

PMID: 32048560


Comparison of Multivendor Single-Voxel MR Spectroscopy Data Acquired in Healthy Brain at 26 Sites.

Považan M, Mikkelsen M, Berrington A, Bhattacharyya PK, Brix MK, Buur PF, Cecil KM, Chan KL, Chen DYT, Craven AR, Cuypers K, Dacko M, Duncan NW, Dydak U, Edmondson DA, Ende G, Ersland L, Forbes MA, Gao F, Greenhouse I, Harris AD, He N, Heba S, Hoggard N, Hsu TW, Jansen JFA, Kangarlu A, Lange T, Lebel RM, Li Y, Lin CE, Liou JK, Lirng JF, Liu F, Long JR, Ma R, Maes C, Moreno-Ortega M, Murray SO, Noah S, Noeske R, Noseworthy MD, Oeltzschner G, Porges EC, Prisciandaro JJ, Puts NAJ, Roberts TPL, Sack M, Sailasuta N, Saleh MG, Schallmo MP, Simard N, Stoffers D, Swinnen SP, Tegenthoff M, Truong P, Wang G, Wilkinson ID, Wittsack HJ, Woods AJ, Xu H, Yan F, Zhang C, Zipunnikov V, Zöllner HJ, Edden RAE, Barker PB.

Radiology. 2020 Feb 11:191037. doi: 10.1148/radiol.2020191037. [Epub ahead of print]

PMID: 32043950

An in vivo brain-bacteria interface: the developing brain as a key regulator of innate immunity.

Herrera-Rincon C, Paré JF, Martyniuk CJ, Jannetty SK, Harrison C, Fischer A, Dinis A, Keshari V, Novak R, Levin M.

NPJ Regen Med. 2020 Feb 4;5:2. doi: 10.1038/s41536-020-0087-2. eCollection 2020.

PMID: 32047653

 

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