UFGI Publication Round-up: Week 3/15/21

17 Mar 2021

Two new species and a new record of Bopyrinae (Isopoda: Bopyridae) infesting Alpheidae and Hippolytidae, with comments on the genus Bopyrina Kossmann, 1881.

An J, Xi Q, Paulay G.

Syst Parasitol. 2021 Mar 8. doi: 10.1007/s11230-021-09968-2. Online ahead of print.

PMID: 33686565

KDM2B Overexpression Facilitates Lytic De Novo KSHV Infection by Inducing AP-1 Activity Through Interaction with the SCF E3 Ubiquitin Ligase Complex.

Naik NG, Lee SC, Alonso JD, Toth Z.

J Virol. 2021 Mar 10:JVI.00331-21. doi: 10.1128/JVI.00331-21. Online ahead of print.

PMID: 33692209

Mining Twitter to assess the determinants of health behavior toward human papillomavirus vaccination in the United States.

Zhang H, Wheldon C, Dunn AG, Tao C, Huo J, Zhang R, Prosperi M, Guo Y, Bian J.

J Am Med Inform Assoc. 2020 Feb 1;27(2):225-235. doi: 10.1093/jamia/ocz191.

PMID: 31711186

High-throughput methods for efficiently building massive phylogenies from natural history collections.

Folk RA, Kates HR, LaFrance R, Soltis DE, Soltis PS, Guralnick RP.

Appl Plant Sci. 2021 Feb 27;9(2):e11410. doi: 10.1002/aps3.11410. eCollection 2021 Feb.

PMID: 33680581

Dihydrouridine synthesis in tRNAs is under reductive evolution in mollicutes.

Faivre B, Lombard M, Fakroun S, Vo CD, Goyenvalle C, Guérineau V, Pecqueur L, Fontecave M, de Crécy-Lagard V, Brégeon D, Hamdane D.

RNA Biol. 2021 Mar 8. doi: 10.1080/15476286.2021.1899653. Online ahead of print.

PMID: 33685366

Systematic Analysis of Extracting Data on Advance Directives from Patient Electronic Health Records (EHR) in Terminal Oncology Patients.

Starr JS, Skelton WP 4th, Rahmanian KP, Guenther R, Allen WL, George TJ, Moseley RE.

J Palliat Care. 2021 Mar 12:8258597211001153. doi: 10.1177/08258597211001153. Online ahead of print.

PMID: 33711237

Error-free recombination in sugarcane mediated by only 30 nucleotides of homology and CRISPR/Cas9 induced DNA breaks or Cre-recombinase.

Zhao Y, Karan R, Altpeter F.

Biotechnol J. 2021 Mar 12:e2000650. doi: 10.1002/biot.202000650. Online ahead of print.

PMID: 33710783

Loss of RE-1 silencing transcription factor accelerates exocrine damage from pancreatic injury.

Bray JK, Elgamal OA, Jiang J, Wright LS, Sutaria DS, Badawi M, Borcyk MG, Liu X, Fredenburg KM, Campbell-Thompson ML, Schmittgen TD.

Cell Death Dis. 2020 Feb 20;11(2):138. doi: 10.1038/s41419-020-2269-7.

PMID: 32080178

Antiviral activity of 1,4-disubstituted-1,2,3-triazoles against HSV-1 in vitro.

Viegas DJ, da Silva VD, Buarque CD, Bloom DC, Abreu PA.

Antivir Ther. 2021 Mar 11. doi: 10.3851/IMP3387. Online ahead of print.

PMID: 33705354

Investigating Shared Genetic Basis Across Tourette Syndrome and Comorbid Neurodevelopmental Disorders Along the Impulsivity-Compulsivity Spectrum.

Yang Z, Wu H, Lee PH, Tsetsos F, Davis LK, Yu D, Lee SH, Dalsgaard S, Haavik J, Barta C, Zayats T, Eapen V, Wray NR, Devlin B, Daly M, Neale B, Børglum AD, Crowley JJ, Scharf J, Mathews CA, Faraone SV, Franke B, Mattheisen M, Smoller JW, Paschou P.

Biol Psychiatry. 2021 Jan 8:S0006-3223(21)00038-X. doi: 10.1016/j.biopsych.2020.12.028. Online ahead of print.

PMID: 33714545

Insights through Genetics of Halophilic Microorganisms and Their Viruses.

Montalvo-Rodríguez R, Maupin-Furlow JA.

Genes (Basel). 2020 Apr 2;11(4):388. doi: 10.3390/genes11040388.

PMID: 32252451

1, 2, 3, GO! Venture beyond gene ontologies in plant evolutionary research.

Howard CC, Tribble CM, Martínez-Gómez J, Sessa EB, Specht CD, Cellinese N.

Am J Bot. 2021 Mar 8. doi: 10.1002/ajb2.1622. Online ahead of print.

PMID: 33686655

Adeno-associated virus capsid assembly is divergent and stochastic.

Wörner TP, Bennett A, Habka S, Snijder J, Friese O, Powers T, Agbandje-McKenna M, Heck AJR.

Nat Commun. 2021 Mar 12;12(1):1642. doi: 10.1038/s41467-021-21935-5.

PMID: 33712599

Identification of active and inactive agonists/antagonists of estrogen receptor based on Tox21 10K compound library: Binomial analysis and structure alert.

Wang J, Huang Y, Wang S, Yang Y, He J, Li C, Zhao YH, Martyniuk CJ.

Ecotoxicol Environ Saf. 2021 Mar 9;214:112114. doi: 10.1016/j.ecoenv.2021.112114. Online ahead of print.

PMID: 33711575

Transcriptomic response patterns of hornyhead turbot (Pleuronichthys verticalis) dosed with polychlorinated biphenyls and polybrominated diphenyl ethers.

Mehinto AC, Thornton Hampton LM, Vidal-Dorsch DE, Garcia-Reyero N, Arick MA 2nd, Maruya KA, Lao W, Vulpe CD, Brown-Augustine M, Loguinov A, Bay SM.

Comp Biochem Physiol Part D Genomics Proteomics. 2021 Mar 1;38:100822. doi: 10.1016/j.cbd.2021.100822. Online ahead of print.

PMID: 33684654

Poldip2 controls leukocyte infiltration into the ischemic brain by regulating focal adhesion kinase-mediated VCAM-1 induction.

Eidson LN, Gao Q, Qu H, Kikuchi DS, Campos ACP, Faidley EA, Sun YY, Kuan CY, Pagano RL, Lassègue B, Tansey MG, Griendling KK, Hernandes MS.

Sci Rep. 2021 Mar 10;11(1):5533. doi: 10.1038/s41598-021-84987-z.

PMID: 33692398

Chronic and Acute Manipulation of Cortical Glutamate Transmission Induces Structural and Synaptic Changes in Co-cultured Striatal Neurons.

Kuhlmann N, Wagner Valladolid M, Quesada-Ramírez L, Farrer MJ, Milnerwood AJ.

Front Cell Neurosci. 2021 Feb 18;15:569031. doi: 10.3389/fncel.2021.569031. eCollection 2021.

PMID: 33679324

The cartilage matrisome in adolescent idiopathic scoliosis.

Wise CA, Sepich D, Ushiki A, Khanshour AM, Kidane YH, Makki N, Gurnett CA, Gray RS, Rios JJ, Ahituv N, Solnica-Krezel L.

Bone Res. 2020 Mar 9;8(1):13. doi: 10.1038/s41413-020-0089-0.

PMID: 33686053