UFGI Publication Round-up: Week of 4/19/21

Draft Genome Sequences of Pseudomonas syringae pv. tomato Strains J4 and J6, Isolated in Florida.

Thapa N, Timilsina S, Minsavage GV, Pereira-Martin J, Vallad GE, Goss EM, Roberts P, Mou Z, Zhang S, Jones JB.
Microbiol Resour Announc. 2021 Apr 15;10(15):e00127-21. doi: 10.1128/MRA.00127-21.

PMID: 33858923

Quantitative mapping of the cellular small RNA landscape with AQRNA-seq.

Hu JF, Yim D, Ma D, Huber SM, Davis N, Bacusmo JM, Vermeulen S, Zhou J, Begley TJ, DeMott MS, Levine SS, de Crécy-Lagard V, Dedon PC, Cao B.
Nat Biotechnol. 2021 Apr 15. doi: 10.1038/s41587-021-00874-y. Online ahead of print.

PMID: 33859402

Structure comparison of the chimeric AAV2.7m8 vector with parental AAV2.

Bennett A, Keravala A, Makal V, Kurian J, Belbellaa B, Aeran R, Tseng YS, Sousa D, Spear J, Gasmi M, Agbandje-McKenna M.
J Struct Biol. 2020 Feb 1;209(2):107433. doi: 10.1016/j.jsb.2019.107433. Epub 2019 Dec 16.

PMID: 31859208

Genome-wide identification of heat shock factors and heat shock proteins in response to UV and high intensity light stress in lettuce.

Kim T, Samraj S, Jiménez J, Gómez C, Liu T, Begcy K.
BMC Plant Biol. 2021 Apr 17;21(1):185. doi: 10.1186/s12870-021-02959-x.

PMID: 33865315

A form of muscular dystrophy associated with pathogenic variants in JAG2.

Coppens S, Barnard AM, Puusepp S, Pajasalu S, Õunap K, Vargas-Franco D, Bruels CC, Donkervoort S, Pais L, Chao KR, Goodrich JK, England EM, Weisburd B, Ganesh VS, Gudmundsson S, O’Donnell-Luria A, Nigul M, Ilves P, Mohassel P, Siddique T, Milone M, Nicolau S, Maroofian R, Houlden H, Hanna MG, Quinlivan R, Beiraghi Toosi M, Ghayoor Karimiani E, Costagliola S, Deconinck N, Kadhim H, Macke E, Lanpher BC, Klee EW, Łusakowska A, Kostera-Pruszczyk A, Hahn A, Schrank B, Nishino I, Ogasawara M, El Sherif R, Stojkovic T, Nelson I, Bonne G, Cohen E, Boland-Augé A, Deleuze JF, Meng Y, Töpf A, Vilain C, Pacak CA, Rivera-Zengotita ML, Bönnemann CG, Straub V, Handford PA, Draper I, Walter GA, Kang PB.
Am J Hum Genet. 2021 Apr 9:S0002-9297(21)00130-0. doi: 10.1016/j.ajhg.2021.03.020. Online ahead of print.

PMID: 33861953

Proinsulin-Reactive CD4 T Cells in the Islets of Type 1 Diabetes Organ Donors.

Landry LG, Anderson AM, Russ HA, Yu L, Kent SC, Atkinson MA, Mathews CE, Michels AW, Nakayama M.
Front Endocrinol (Lausanne). 2021 Mar 25;12:622647. doi: 10.3389/fendo.2021.622647. eCollection 2021.

PMID: 33841327

A new, simple, highly scalable, and efficient protocol for genomic DNA extraction from diverse plant taxa.

Mavrodiev EV, Dervinis C, Whitten WM, Gitzendanner MA, Kirst M, Kim S, Kinser TJ, Soltis PS, Soltis DE.
Appl Plant Sci. 2021 Apr 7;9(3):e11413. doi: 10.1002/aps3.11413. eCollection 2021 Mar.

PMID: 33854847

Molecular dissection of perithecial mating line development in Colletotrichum fructicola, a species with a nontypical mating system featured by plus-to-minus switch and plus-minus mediated sexual enhancement.

Liang X, Yao L, Kong Y, Li B, Hao X, Lin Y, Cao M, Dong Q, Zhang R, Rollins JA, Sun G.
Appl Environ Microbiol. 2021 Apr 16:AEM.00474-21. doi: 10.1128/AEM.00474-21. Online ahead of print.

PMID: 33863706

Characterization of a mouse neuropathic pain model caused by the highly active antiviral therapy (HAART) Stavudine.

Wilkerson JL, Felix JS, Bilbrey JA, McCurdy CR, McMahon LR.
Pharmacol Rep. 2021 Apr 16. doi: 10.1007/s43440-021-00262-y. Online ahead of print.

PMID: 33860918

Oral Pharmacokinetics in Beagle Dogs of the Mitragynine Metabolite, 7-Hydroxymitragynine.

Maxwell EA, King TI, Kamble SH, Raju KSR, Berthold EC, León F, Hampson A, McMahon LR, McCurdy CR, Sharma A.
Eur J Drug Metab Pharmacokinet. 2021 Apr 13. doi: 10.1007/s13318-021-00684-2. Online ahead of print.

PMID: 33847897

CNGB1-related rod-cone dystrophy: a mutation review and update.

Nassisi M, Smirnov V, Hernandez CS, Mohand-Saïd S, Condroyer C, Antonio A, Kühlewein L, Kempf M, Kohl S, Wissinger B, Nasser F, Ragi SD, Wang NK, Sparrow JR, Greenstein V, Michalakis S, Mahroo O, Ba-Abbad R, Michaelides M, Webster AR, Esposti SD, Saffren B, Capasso J, Levin A, Hauswirth WW, Dhaenens CM, Defoort-Dhellemmes S, Tsang SH, Zrenner E, Sahel JA, Petersen-Jones S, Zeitz C, Audo I.
Hum Mutat. 2021 Apr 12. doi: 10.1002/humu.24205.

PMID: 33847019

Community-wide seasonal shifts in thermal tolerances of mosquitoes.

Oliveira BF, Yogo WIG, Hahn DA, Yongxing J, Scheffers BR.
Ecology. 2021 Apr 18:e03368. doi: 10.1002/ecy.3368. Online ahead of print.

PMID: 33866546

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