UFGI Publication Round-up: Week of 11/21/22

Medicaid’s Moment for Protecting and Promoting Women’s Health.

Dar MH, Fotinos C, Cogle CR.

JAMA. 2022 Nov 14. doi: 10.1001/jama.2022.21048. Online ahead of print.

PMID: 36374488

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.

Terlouw BR, Blin K, Navarro-Muñoz JC, Avalon NE, Chevrette MG, Egbert S, Lee S, Meijer D, Recchia MJJ, Reitz ZL, van Santen JA, Selem-Mojica N, Tørring T, Zaroubi L, Alanjary M, Aleti G, Aguilar C, Al-Salihi SAA, Augustijn HE, Avelar-Rivas JA, Avitia-Domínguez LA, Barona-Gómez F, Bernaldo-Agüero J, Bielinski VA, Biermann F, Booth TJ, Carrion Bravo VJ, Castelo-Branco R, Chagas FO, Cruz-Morales P, Du C, Duncan KR, Gavriilidou A, Gayrard D, Gutiérrez-García K, Haslinger K, Helfrich EJN, van der Hooft JJJ, Jati AP, Kalkreuter E, Kalyvas N, Kang KB, Kautsar S, Kim W, Kunjapur AM, Li YX, Lin GM, Loureiro C, Louwen JJR, Louwen NLL, Lund G, Parra J, Philmus B, Pourmohsenin B, Pronk LJU, Rego A, Rex DAB, Robinson S, Rosas-Becerra LR, Roxborough ET, Schorn MA, Scobie DJ, Singh KS, Sokolova N, Tang X, Udwary D, Vigneshwari A, Vind K, Vromans SPJM, Waschulin V, Williams SE, Winter JM, Witte TE, Xie H, Yang D, Yu J, Zdouc M, Zhong Z, Collemare J, Linington RG, Weber T, Medema MH.

Nucleic Acids Res. 2022 Nov 18:gkac1049. doi: 10.1093/nar/gkac1049. Online ahead of print.

PMID: 36399496

Rare tandem repeat expansions associate with genes involved in synaptic and neuronal signaling functions in schizophrenia.

Wen J, Trost B, Engchuan W, Halvorsen M, Pallotto LM, Mitina A, Ancalade N, Farrell M, Backstrom I, Guo K, Pellecchia G, Thiruvahindrapuram B, Giusti-Rodriguez P, Rosen JD, Li Y, Won H, Magnusson PKE, Gyllensten U, Bassett AS, Hultman CM, Sullivan PF, Yuen RKC, Szatkiewicz JP.

Mol Psychiatry. 2022 Nov 16. doi: 10.1038/s41380-022-01857-4. Online ahead of print.

PMID: 36380236

Impact of epistasis effects on the accuracy of predicting phenotypic values of residual feed intake in U. S Holstein cows.

Liang Z, Prakapenka D, Parker Gaddis KL, VandeHaar MJ, Weigel KA, Tempelman RJ, Koltes JE, Santos JEP, White HM, Peñagaricano F, Baldwin Vi RL, Da Y.

Front Genet. 2022 Nov 1;13:1017490. doi: 10.3389/fgene.2022.1017490. eCollection 2022.

PMID: 36386803

Trained Immunity: A Potential Approach for Improving Host Immunity in Neonatal Sepsis.

Polcz VE, Rincon JC, Hawkins RB, Barrios EL, Efron PA, Moldawer LL, Larson SD.

Shock. 2022 Nov 17. doi: 10.1097/SHK.0000000000002054. Online ahead of print.

PMID: 36383390

Engineering triacylglycerol accumulation in duckweed (Lemna japonica).

Liang Y, Yu XH, Anaokar S, Shi H, Dahl WB, Cai Y, Luo G, Chai J, Cai Y, Mollá-Morales A, Altpeter F, Ernst E, Schwender J, Martienssen RA, Shanklin J.

Plant Biotechnol J. 2022 Oct 9. doi: 10.1111/pbi.13943. Online ahead of print.

PMID: 36209479

MEGARes and AMR++, v3.0: an updated comprehensive database of antimicrobial resistance determinants and an improved software pipeline for classification using high-throughput sequencing.

Bonin N, Doster E, Worley H, Pinnell LJ, Bravo JE, Ferm P, Marini S, Prosperi M, Noyes N, Morley PS, Boucher C.

Nucleic Acids Res. 2022 Nov 16:gkac1047. doi: 10.1093/nar/gkac1047. Online ahead of print.

PMID: 36382407

Superenhancer-activation of KLHDC8A drives glioma ciliation and hedgehog signaling.

Lee D, Gimple RC, Wu X, Prager BC, Qiu Z, Wu Q, Daggubati V, Mariappan A, Gopalakrishnan J, Sarkisian MR, Raleigh DR, Rich JN.

J Clin Invest. 2022 Nov 17:e163592. doi: 10.1172/JCI163592. Online ahead of print.

PMID: 36394953

Publisher Correction: Stroke genetics informs drug discovery and risk prediction across ancestries.

Mishra A, Malik R, Hachiya T, Jürgenson T, Namba S, Posner DC, Kamanu FK, Koido M, Le Grand Q, Shi M, He Y, Georgakis MK, Caro I, Krebs K, Liaw YC, Vaura FC, Lin K, Winsvold BS, Srinivasasainagendra V, Parodi L, Bae HJ, Chauhan G, Chong MR, Tomppo L, Akinyemi R, Roshchupkin GV, Habib N, Jee YH, Thomassen JQ, Abedi V, Cárcel-Márquez J, Nygaard M, Leonard HL, Yang C, Yonova-Doing E, Knol MJ, Lewis AJ, Judy RL, Ago T, Amouyel P, Armstrong ND, Bakker MK, Bartz TM, Bennett DA, Bis JC, Bordes C, Børte S, Cain A, Ridker PM, Cho K, Chen Z, Cruchaga C, Cole JW, de Jager PL, de Cid R, Endres M, Ferreira LE, Geerlings MI, Gasca NC, Gudnason V, Hata J, He J, Heath AK, Ho YL, Havulinna AS, Hopewell JC, Hyacinth HI, Inouye M, Jacob MA, Jeon CE, Jern C, Kamouchi M, Keene KL, Kitazono T, Kittner SJ, Konuma T, Kumar A, Lacaze P, Launer LJ, Lee KJ, Lepik K, Li J, Li L, Manichaikul A, Markus HS, Marston NA, Meitinger T, Mitchell BD, Montellano FA, Morisaki T, Mosley TH, Nalls MA, Nordestgaard BG, O’Donnell MJ, Okada Y, Onland-Moret NC, Ovbiagele B, Peters A, Psaty BM, Rich SS, Rosand J, Sabatine MS, Sacco RL, Saleheen D, Sandset EC, Salomaa V, Sargurupremraj M, Sasaki M, Satizabal CL, Schmidt CO, Shimizu A, Smith NL, Sloane KL, Sutoh Y, Sun YV, Tanno K, Tiedt S, Tatlisumak T, Torres-Aguila NP, Tiwari HK, Trégouët DA, Trompet S, Tuladhar AM, Tybjærg-Hansen A, van Vugt M, Vibo R, Verma SS, Wiggins KL, Wennberg P, Woo D, Wilson PWF, Xu H, Yang Q, Yoon K; COMPASS Consortium; INVENT Consortium; Dutch Parelsnoer Initiative (PSI) Cerebrovascular Disease Study Group; Estonian Biobank; PRECISE4Q Consortium; FinnGen Consortium; NINDS Stroke Genetics Network (SiGN); MEGASTROKE Consortium; SIREN Consortium; China Kadoorie Biobank Collaborative Group; VA Million Veteran Program; International Stroke Genetics Consortium (ISGC); Biobank Japan; CHARGE Consortium; GIGASTROKE Consortium, Millwood IY, Gieger C, Ninomiya T, Grabe HJ, Jukema JW, Rissanen IL, Strbian D, Kim YJ, Chen PH, Mayerhofer E, Howson JMM, Irvin MR, Adams H, Wassertheil-Smoller S, Christensen K, Ikram MA, Rundek T, Worrall BB, Lathrop GM, Riaz M, Simonsick EM, Kõrv J, França PHC, Zand R, Prasad K, Frikke-Schmidt R, de Leeuw FE, Liman T, Haeusler KG, Ruigrok YM, Heuschmann PU, Longstreth WT, Jung KJ, Bastarache L, Paré G, Damrauer SM, Chasman DI, Rotter JI, Anderson CD, Zwart JA, Niiranen TJ, Fornage M, Liaw YP, Seshadri S, Fernández-Cadenas I, Walters RG, Ruff CT, Owolabi MO, Huffman JE, Milani L, Kamatani Y, Dichgans M, Debette S.

Nature. 2022 Nov 14. doi: 10.1038/s41586-022-05492-5. Online ahead of print.

PMID: 36376532

Evidence for the Presence of Hyphae and Fruiting Body Calcium Oxalate Crystallites in the Split Gill Medicinal Mushroom Schizophyllum commune (Agaricomycetes).

Xiao X, Huang T, Zhang J, Liu W, Ji H, Keyhani NO, Chen H, Wu W, Song C.

Int J Med Mushrooms. 2022;24(10):83-91. doi: 10.1615/IntJMedMushrooms.2022045062.

PMID: 36374832

Acetylation of a fungal effector that translocates host PR1 facilitates virulence.

Li J, Ma X, Wang C, Liu S, Yu G, Gao M, Qian H, Liu M, Luisi BF, Gabriel DW, Liang W.

Elife. 2022 Nov 14;11:e82628. doi: 10.7554/eLife.82628. Online ahead of print.

PMID: 36374166