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UFGI Publication round-up week 6/9/20

ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.

Dardaillon J, Dauga D, Simion P, Faure E, Onuma TA, DeBiasse MB, Louis A, Nitta KR, Naville M, Besnardeau L, Reeves W, Wang K, Fagotto M, Guéroult-Bellone M, Fujiwara S, Dumollard R, Veeman M, Volff JN, Roest Crollius H, Douzery E, Ryan JF, Davidson B, Nishida H, Dantec C, Lemaire P.

Nucleic Acids Res. 2020 Jan 8;48(D1):D668-D675. doi: 10.1093/nar/gkz955.

PMID: 31680137

 

Molecular Changes in Mesembryanthemum Crystallinum Guard Cells Underlying the C 3 to CAM Transition

Kong W, Yoo MJ, Zhu D, Noble JD, Kelley TM, Li J, Kirst M, Assmann SM, Chen S.

Plant Mol Biol. 2020 May 28. doi: 10.1007/s11103-020-01016-9. [Epub ahead of print]

PMID: 32468353

 

A Snapshot of SARS-CoV-2 Genome Availability up to April 2020 and its Implications: Data Analysis.

Mavian C, Marini S, Prosperi M, Salemi M.

JMIR Public Health Surveill. 2020 Jun 1;6(2):e19170. doi: 10.2196/19170.

PMID: 32412415

 

Transfer of Xanthomonas campestris Pv. arecae and X. campestris Pv. musacearum to X. Vasicola (Vauterin) as X. Vasicola Pv. arecae Comb. Nov. And X. Vasicola Pv. musacearum Comb. Nov. And Description of X. Vasicola Pv. vasculorum Pv. Nov

Studholme DJ, Wicker E, Abrare SM, Aspin A, Bogdanove A, Broders K, Dubrow Z, Grant M, Jones JB, Karamura G, Lang J, Leach J, Mahuku G, Nakato GV, Coutinho T, Smith J, Bull CT.

Phytopathology. 2020 Jun;110(6):1153-1160. doi: 10.1094/PHYTO-03-19-0098-LE. Epub 2020 Jan 10.

PMID: 31922946

 

Effect of prepartum energy intake and supplementation with ruminally protected choline on innate and adaptive immunity of multiparous Holstein cows.

Zenobi MG, Gardinal R, Zuniga JE, Mamedova LK, Driver JP, Barton BA, Santos JEP, Staples CR, Nelson CD.

J Dairy Sci. 2020 Mar;103(3):2200-2216. doi: 10.3168/jds.2019-17378. Epub 2020 Jan 15.

PMID: 31954584

 

Ethical decision-making for children with neuromuscular disorders in the COVID-19 crisis.

Laventhal NT, Graham RJ, Rasmussen SA, Urion DK, Kang PB.

Neurology. 2020 Jun 1. pii: 10.1212/WNL.0000000000009936. doi: 10.1212/WNL.0000000000009936. [Epub ahead of print]

PMID: 32482844

 

Treating hoarding disorder with compassion-focused therapy: A pilot study examining treatment feasibility, acceptability, and exploring treatment effects.

Chou CY, Tsoh JY, Shumway M, Smith LC, Chan J, Delucchi K, Tirch D, Gilbert P, Mathews CA.

Br J Clin Psychol. 2020 Mar;59(1):1-21. doi: 10.1111/bjc.12228. Epub 2019 Jul 4.

PMID: 31271462

 

Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria.

Tao X, Feng J, Yang Y, Wang G, Tian R, Fan F, Ning D, Bates CT, Hale L, Yuan MM, Wu L, Gao Q, Lei J, Schuur EAG, Yu J, Bracho R, Luo Y, Konstantinidis KT, Johnston ER, Cole JR, Penton CR, Tiedje JM, Zhou J.

Microbiome. 2020 Jun 5;8(1):84. doi: 10.1186/s40168-020-00838-5.

PMID: 32503635

 

Body size trends in response to climate and urbanization in the widespread North American deer mouse, Peromyscus maniculatus.

Guralnick R, Hantak MM, Li D, McLean BS.

Sci Rep. 2020 Jun 1;10(1):8882. doi: 10.1038/s41598-020-65755-x.

PMID: 32483167

 

Ancient DNA and high-resolution chronometry reveal a long-term human role in the historical diversity and biogeography of the Bahamian hutia.

Oswald JA, Allen JM, LeFebvre MJ, Stucky BJ, Folk RA, Albury NA, Morgan GS, Guralnick RP, Steadman DW.

Sci Rep. 2020 Jan 28;10(1):1373. doi: 10.1038/s41598-020-58224-y.

PMID: 31992804

 

GLI3 resides at the intersection of hedgehog and androgen action to promote male sex differentiation.

Kothandapani A, Lewis SR, Noel JL, Zacharski A, Krellwitz K, Baines A, Winske S, Vezina CM, Kaftanovskaya EM, Agoulnik AI, Merton EM, Cohn MJ, Jorgensen JS.

PLoS Genet. 2020 Jun 4;16(6):e1008810. doi: 10.1371/journal.pgen.1008810. [Epub ahead of print]

PMID: 32497091

 

A two-tier bioinformatic pipeline to develop probes for target capture of nuclear loci with applications in Melastomataceae.

Jantzen JR, Amarasinghe P, Folk RA, Reginato M, Michelangeli FA, Soltis DE, Cellinese N, Soltis PS.

Appl Plant Sci. 2020 May 9;8(5):e11345. doi: 10.1002/aps3.11345. eCollection 2020 May.

PMID: 32477841

 

Patterns of HSV-1 infection in neural progenitor cells.

Zheng W, Klammer AM, Naciri JN, Yeung J, Demers M, Milosevich J, Kinchington PR, Bloom DC, Nimgaonkar VL, D’Aiuto L.

J Virol. 2020 Jun 3. pii: JVI.00994-20. doi: 10.1128/JVI.00994-20. [Epub ahead of print]

PMID: 32493817

 

Effectiveness of tunnel ventilation as dairy cow housing in hot climates: rectal temperatures during heat stress and seasonal variation in milk yield.

Dikmen S, Larson CC, De Vries A, Hansen PJ.

Trop Anim Health Prod. 2020 May 30. doi: 10.1007/s11250-020-02309-3. [Epub ahead of print]

PMID: 32474756

 

An Independent Locus Upstream of ASIP Controls Variation in the Shade of the Bay Coat Colour in Horses

Corbin LJ, Pope J, Sanson J, Antczak DF, Miller D, Sadeghi R, Brooks SA.

Genes (Basel). 2020 May 30;11(6). pii: E606. doi: 10.3390/genes11060606.

PMID: 32486210

 

Evaluation of photoreceptor transduction efficacy of capsid-modified AAV vectors following intravitreal and subretinal delivery in sheep.

Ross M, Obolensky A, Averbukh E, Ezra-Elia R, Yamin E, Honig H, Dvir H, Rosov A, Hauswirth WW, Gootwine E, Banin E, Ofri R.

Hum Gene Ther. 2020 Jun 3. doi: 10.1089/hum.2020.023. [Epub ahead of print]

PMID: 32486858

 

Mining Twitter to Assess the Determinants of Health Behavior towards Palliative Care in the United States.

Zhao Y, Zhang H, Huo J, Guo Y, Wu Y, Prosperi M, Bian J.

AMIA Jt Summits Transl Sci Proc. 2020 May 30;2020:730-739. eCollection 2020.

PMID: 32477696

 

Small-molecule targeted recruitment of a nuclease to cleave an oncogenic RNA in a mouse model of metastatic cancer.

Costales MG, Aikawa H, Li Y, Childs-Disney JL, Abegg D, Hoch DG, Pradeep Velagapudi S, Nakai Y, Khan T, Wang KW, Yildirim I, Adibekian A, Wang ET, Disney MD.

Proc Natl Acad Sci U S A. 2020 Feb 4;117(5):2406-2411. doi: 10.1073/pnas.1914286117. Epub 2020 Jan 21.

PMID: 31964809

 

Biodegradable PLGA- b-PEG Nanoparticles Induce T Helper 2 (Th2) Immune Responses and Sustained Antibody Titers via TLR9 Stimulation

Wilson KL, Howard GP, Coatsworth H, Dinglasan RR, Mao HQ, Plebanski M.

Vaccines (Basel). 2020 May 29;8(2). pii: E261. doi: 10.3390/vaccines8020261.

PMID: 32485944

 

Over-expression of poplar NAC15 gene enhances wood formation in transgenic tobacco.

Yao W, Zhang D, Zhou B, Wang J, Li R, Jiang T.

BMC Plant Biol. 2020 Jan 8;20(1):12. doi: 10.1186/s12870-019-2191-2.

PMID: 31914923

 

Attenuation of Heparan Sulfate Proteoglycan Binding Enhances In Vivo Transduction of Human Primary Hepatocytes With AAV2

Cabanes-Creus M, Westhaus A, Navarro RG, Baltazar G, Zhu E, Amaya AK, Liao SHY, Scott S, Sallard E, Dilworth KL, Rybicki A, Drouyer M, Hallwirth CV, Bennett A, Santilli G, Thrasher AJ, Agbandje-McKenna M, Alexander IE, Lisowski L.

Mol Ther Methods Clin Dev. 2020 May 13;17:1139-1154. doi: 10.1016/j.omtm.2020.05.004. eCollection 2020 Jun 12.

PMID: 32490035

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