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UFGI Publication round- up week 6/24

Sarlo Davila KM, Hamblen H, Hansen PJ, Dikmen S, Oltenacu PA, Mateescu RG.

J Anim Sci. 2019 Jun 19. pii: skz188. doi: 10.1093/jas/skz188. [Epub ahead of print]

PMID: 31214688

Reduction of Autophagic Accumulation in Pompe Disease Mouse Model Following Gene Therapy.

McCall AL, Stankov SG, Cowen G, Cloutier D, Zhang Z, Yang L, Clement N, Falk DJ, Byrne BJ.

Curr Gene Ther. 2019 Jun 21. doi: 10.2174/1566523219666190621113807.

PMID: 31223086

Variable and Variant Protein Multigene Families in Babesia bovis Persistence.

Allred DR.

Pathogens. 2019 Jun 11;8(2). pii: E76. doi: 10.3390/pathogens8020076. Review.

PMID: 31212587

Phosphorylated lipid-conjugated oligonucleotide selectively anchors on cell membranes with high alkaline phosphatase expression.

Jin C, He J, Zou J, Xuan W, Fu T, Wang R, Tan W.

Nat Commun. 2019 Jun 20;10(1):2704. doi: 10.1038/s41467-019-10639-6.

PMID: 31221964

Dichloroacetate-induced peripheral neuropathy.

Stacpoole PW, Martyniuk CJ, James MO, Calcutt NA.

Int Rev Neurobiol. 2019;145:211-238. doi: 10.1016/bs.irn.2019.05.003. Epub 2019 Jun 11.

PMID: 31208525

Special issue on aquaculture: New opportunities to address global food supply for comparative biochemistry and physiology.

Hedrick MS, Moyes CD, Grosell M, Martyniuk CJ.

Comp Biochem Physiol B Biochem Mol Biol. 2019 Jul;233:1-3. doi: 10.1016/j.cbpb.2019.03.005. Epub 2019 Mar 13.

PMID: 30878485

Evolution of limb development in cephalopod mollusks.

Tarazona OA, Lopez DH, Slota LA, Cohn MJ.

Elife. 2019 Jun 18;8. pii: e43828. doi: 10.7554/eLife.43828.

PMID: 31210127

Selected research articles from the 2018 International Workshop on Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC).

Yoon BJ, Qian X, Kahveci T, Pal R.

BMC Bioinformatics. 2019 Jun 20;20(Suppl 12):316. doi: 10.1186/s12859-019-2830-5. No abstract available.

PMID: 31217001

Characterizing building blocks of resource constrained biological networks.

Ren Y, Ay A, Dobra A, Kahveci T.

BMC Bioinformatics. 2019 Jun 20;20(Suppl 12):318. doi: 10.1186/s12859-019-2838-x.

PMID: 31216986

For common community phylogenetic analyses, go ahead and use synthesis phylogenies.

Li D, Trotta L, Marx HE, Allen JM, Sun M, Soltis DE, Soltis PS, Guralnick RP, Baiser B.

Ecology. 2019 Jun 21:e02788. doi: 10.1002/ecy.2788. [Epub ahead of print]

PMID: 31225900


Phylogenomic conflict resulting from ancient introgression following species diversification in Stewartia s.l. (Theaceae).

Lin HY, Hao YJ, Li JH, Fu CX, Soltis PS, Soltis DE, Zhao YP.

Mol Phylogenet Evol. 2019 Jun;135:1-11. doi: 10.1016/j.ympev.2019.02.018. Epub 2019 Feb 23.

PMID: 30802596

Down regulation of p-coumarate 3-hydroxylase in petunia uniquely alters the profile of emitted floral volatiles.

Kim JY, Swanson RT, Alvarez MI, Johnson TS, Cho KH, Clark DG, Colquhoun TA.

Sci Rep. 2019 Jun 20;9(1):8852. doi: 10.1038/s41598-019-45183-2.

PMID: 31221970

Complete Sequence and Annotation of the Mycoplasma phocicerebrale Strain 1049T Genome.

Frasca S Jr, Castellanos Gell J, Kutish GF, Michaels DL, Brown DR.

Microbiol Resour Announc. 2019 Jun 20;8(25). pii: e00514-19. doi: 10.1128/MRA.00514-19.

PMID: 31221652

MADEx: A System for Detecting Medications, Adverse Drug Events, and Their Relations from Clinical Notes.

Yang X, Bian J, Gong Y, Hogan WR, Wu Y.

Drug Saf. 2019 Jan;42(1):123-133. doi: 10.1007/s40264-018-0761-0.

PMID: 30600484

The Thm1 Zn(II)2 Cys6 transcription factor contributes to heat, membrane integrity and virulence in the insect pathogenic fungus Beauveria bassiana.

Huang S, Keyhani NO, Zhao X, Zhang Y.

Environ Microbiol. 2019 Jun 18. doi: 10.1111/1462-2920.14718. [Epub ahead of print]

PMID: 31211497


A genomics-informed computational biology platform prospectively predicts treatment responses in AML and MDS patients.

Drusbosky LM, Singh NK, Hawkins KE, Salan C, Turcotte M, Wise EA, Meacham A, Vijay V, Anderson GG, Kim CC, Radhakrishnan S, Ullal Y, Talawdekar A, Sikora H, Nair P, Khanna-Gupta A, Abbasi T, Vali S, Guha S, Farhadfar N, Murthy HS, Horn BN, Leather HL, Castillo P, Tucker C, Cline C, Pettiford L, Lamba JK, Moreb JS, Brown RA, Norkin M, Hiemenz JW, Hsu JW, Slayton WB, Wingard JR, Cogle CR.

Blood Adv. 2019 Jun 25;3(12):1837-1847. doi: 10.1182/bloodadvances.2018028316.

PMID: 31208955

Systemic Regulation of Bone Marrow Stromal Cytokines After Severe Trauma.

Miller ES, Loftus TJ, Kannan KB, Plazas JM, Efron PA, Mohr AM.

J Surg Res. 2019 Jun 14;243:220-228. doi: 10.1016/j.jss.2019.05.033. [Epub ahead of print]

PMID: 31207479

Clinical implementation of rapid CYP2C19 genotyping to guide antiplatelet therapy after percutaneous coronary intervention.

Cavallari LH, Franchi F, Rollini F, Been L, Rivas A, Agarwal M, Smith DM, Newsom K, Gong Y, Elsey AR, Starostik P, Johnson JA, Angiolillo DJ.

J Transl Med. 2018 Apr 11;16(1):92. doi: 10.1186/s12967-018-1469-8.

PMID: 29642909

Evolution of the Mutational Process under Relaxed Selection in Caenorhabditis elegans.

Saxena AS, Salomon MP, Matsuba C, Yeh SD, Baer CF.

Mol Biol Evol. 2019 Feb 1;36(2):239-251. doi: 10.1093/molbev/msy213.

PMID: 30445510

Birth seasonality studies in a large Prader-Willi syndrome cohort.

Butler MG, Kimonis V, Dykens E, Gold JA, Tamura R, Miller JL, Driscoll DJ.

Am J Med Genet A. 2019 Jun 21. doi: 10.1002/ajmg.a.61263. [Epub ahead of print]

PMID: 31225937

Letter regarding “Prevalence of Growth Hormone Deficiency in previously GH-treated young adults with Prader-Willi syndrome” by Donze et al.

Höybye C, Tauber M, Angulo MA, Eiholzer U, Driscoll DJ, Cassidy SB, Holland AJ.

Clin Endocrinol (Oxf). 2019 Jun 18. doi: 10.1111/cen.14047. [Epub ahead of print]

PMID: 31215054